Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0876 ATGATTCGAAGAGCTCTATGCTTCCCCAGTTTCATCAGGAAATCGCTGCTTATTCCACCCGTTATTTCTCCTTATTCTAATTCTTCCTCCAAGATCGGAGCTTACAATGGGTATGCATCTCAGACGTCTTCTCTTGAAGTTCCGGACTCAGCACCTTACAGGGAAAATGATGAGTATGCTGATGTGGACTGGGATAACCTTGGATTTGGACTAATGCCAACTGATTACATGTATGTAAACAAATGTGGTGCGGGGCAGCATTTTGGACATGGACAACTCAATCCTTATGGCAACATTCACCTTAGCCCATCAGCTGCTGTCTTAAATTATGGGCAGGGATTATTCGAAGGCACGAAAGCATACAGAAAAGAGAACGGGCAACTGCTTCTGTTCCGTCCAGAACAAAATGCCATTCGGATGAAGAGTGGCGCACAAAGAATGTGCATGGAAGCCCCTTCCGTTGACCAATTTGTCAACGCTTTGAAACAAACTGCTTTGGCTAATAAGCGCTGGGTTCCTCCTCCGGGGAAAGGATCGTTGTACCTTAGGCCTCTGCTTATAGGAAGCGGTGCGGTTTTGGGTTTGGCTCCAGCACCTGAATACACTTTCCTCATATATGCTTCCCCTGTTCGCAACTATTTCAAAGAGGGCTCTGCGCCACTCAACTTGTACGTAGAGGAGAATTTTGATCGTGCTTCTCGCCGCGGCACCGGCAGCGTTAAAACCATTTCTAATTATGCCCCTGTATTGATGGCGCAACTTAGAGCCAAGAAGAATGGATTTTCGGATGTGTTGTACCTGGACTCAGCCACCAAGAAGAATCTAGAGGAGGTTTCTTCTTGTAACATTTTTATTGCCAAGGGAAGATGCATCTCAACACCTGGTACTAATGGAACCATTCTTGCTGGAATCACGAGAAAAAGCGTCATTGAACTTGCCCGTGATCACGGCTATGAGGTACAAGAGCGTGCTGTAGCTGTGGATGAATTAATGGAGGCTGATGAGGTTTTCTGCACGGGAACTGCTGTTGGTGTTGCTCCAGTCGGAGCCATCACATACCAAAATACAAGGATGGAATATAAAACGGGCTCTGGAACTATTTGTCAAGAGCTGTATAATACCCTTTTGGGAATTCAAACGGGTGCTATTGAAGATAAGAAGGGATGGATCATTGAAATTGACTGA 1185 0.4565 MIRRALCFPSFIRKSLLIPPVISPYSNSSSKIGAYNGYASQTSSLEVPDSAPYRENDEYADVDWDNLGFGLMPTDYMYVNKCGAGQHFGHGQLNPYGNIHLSPSAAVLNYGQGLFEGTKAYRKENGQLLLFRPEQNAIRMKSGAQRMCMEAPSVDQFVNALKQTALANKRWVPPPGKGSLYLRPLLIGSGAVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQLRAKKNGFSDVLYLDSATKKNLEEVSSCNIFIAKGRCISTPGTNGTILAGITRKSVIELARDHGYEVQERAVAVDELMEADEVFCTGTAVGVAPVGAITYQNTRMEYKTGSGTICQELYNTLLGIQTGAIEDKKGWIIEID* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0876 394 PANTHER AMINO ACID AMINOTRANSFERASE 27 394 IPR005786 GO:0004084|GO:0009081
Amo08g0876 394 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 27 394 - -
Amo08g0876 394 ProSitePatterns Aminotransferases class-IV signature. 277 306 IPR018300 GO:0003824
Amo08g0876 394 PIRSF BCAT1 40 394 IPR005786 GO:0004084|GO:0009081
Amo08g0876 394 CDD BCAT_beta_family 100 381 IPR033939 GO:0004084|GO:0009081
Amo08g0876 394 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 54 390 IPR036038 GO:0003824
Amo08g0876 394 Gene3D - 37 221 IPR043131 -
Amo08g0876 394 Pfam Amino-transferase class IV 113 351 IPR001544 GO:0003824
Amo08g0876 394 Gene3D - 222 393 IPR043132 -
Amo08g0876 394 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 90 393 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0876 Amo-Chr8 15018362 15023911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0876 K00826 - gmx:100782644 630.172