Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0873 ATGTTGTCTAGAAAGGCTAGTAAGGACTCTCATGGTCAAGACTCTTCTTATTTTCAAGGATGGCAAGAGTATGAGAAAAACTCTTATCATCCCATTCAAAATCCAATGGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTGAATCTTGGCTCCGAAGAAACTCTAATACAATGGCATTGAAGAAAGATGGAGTTTCTGCATTTAAAGATCTTGCTTTGTTTCAGGATTACCATGGTTTGCCAGCTTTCAAAGAAGCGTTAGTGAACTTTATGACAAGCATGAGAGGAAACAAAATCAAATATAGTTCAGACAAGCTTGTTCTCACAGCTGGAGCAACCGCTGCAAATGAAATTCTCATGTTTTGTCTGACTGACCCTGGCCAAGCCTTCATCCTCCCCACACCCTATTATCCTGGGTTCGATAGAGATCTGAAATGGCGAACCGGGGCTGAGATTGTTCCAATGCATTGCTCAAGCTCAAATGGTTTTAGAATCACTCGTTGCGCCTTAGAACAAGCCTATCAATTAGGCCAAGAATTGAACCTCAAGATCAAAGGAGTACTAGTGACTAACCCCTCAAATCCACTAGGCACCACAATGACCAAAACAGAACTGAACCACTTGCTCGATTTCGCAATCGACAAGAACATTCACATAGTAAGCGACGAAATCTATTCAGGCACCGTCTTCGACTGCTCCTCCACCACCGGTTTCACAAGCATCATGGAAGTGCTGAACGAGAGAAACAACAATAATTATAATAACATTAGGAACCATATTCACATGGTGTATAGTCTCTCAAAGGACTTAGGTCTCCCTGGGTTTAGAGTAGGTTTGATTTACTCAAACAATGAAAAAGTTATCGCCGCAGCCACAAAGATGTCAAGCTTTGCACTTGTTTCGTCACAAACTCAATTCATGCTTTCAAACTTGCTATCCGACGCTAAGTTCATTAAGAAATACATGGTGGAGAACCAGAGGAGGTTGAAGAGGCGCAAGGACATGCTTGTGCGTGGATTAAGGAAGGCAGGGATATCGTGTTTAAGGAGCAATGCTGGATTGTTCTGTTGGGTGGACATGAGGCACTTGTTGAGTTCAGATTCGTTTGAAGCGGAGAAGGAACTTTGGAAGAGGATTGTGTGTGAGGTTGGTTTGAACATATCACCAGGAAGATTGAATAGAAAAAGGAGAAGAAGAATAGCACGGTGTCGGCGACTACGCCTTAACAAGAATCTACTGTCCGGTGTCACCATGGTCATCGACGAGATTAGGAGGTGCAGTGGTGGCAGCAGCTTCTCAGACGAGCAAAGACAGAAATAG 1338 0.4312 MLSRKASKDSHGQDSSYFQGWQEYEKNSYHPIQNPMGIIQMGLAENQLSFDLLESWLRRNSNTMALKKDGVSAFKDLALFQDYHGLPAFKEALVNFMTSMRGNKIKYSSDKLVLTAGATAANEILMFCLTDPGQAFILPTPYYPGFDRDLKWRTGAEIVPMHCSSSNGFRITRCALEQAYQLGQELNLKIKGVLVTNPSNPLGTTMTKTELNHLLDFAIDKNIHIVSDEIYSGTVFDCSSTTGFTSIMEVLNERNNNNYNNIRNHIHMVYSLSKDLGLPGFRVGLIYSNNEKVIAAATKMSSFALVSSQTQFMLSNLLSDAKFIKKYMVENQRRLKRRKDMLVRGLRKAGISCLRSNAGLFCWVDMRHLLSSDSFEAEKELWKRIVCEVGLNISPGRLNRKRRRRIARCRRLRLNKNLLSGVTMVIDEIRRCSGGSSFSDEQRQK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0873 445 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 1 397 - -
Amo08g0873 445 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 271 284 IPR004838 GO:0003824|GO:0009058|GO:0030170
Amo08g0873 445 Gene3D Aspartate Aminotransferase, domain 1 27 398 IPR015422 GO:0003824
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 187 211 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 133 154 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 223 246 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 74 90 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 131 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Amo08g0873 445 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
Amo08g0873 445 CDD AAT_like 80 384 - -
Amo08g0873 445 Gene3D - 61 320 IPR015421 GO:0003824
Amo08g0873 445 SUPERFAMILY PLP-dependent transferases 1 398 IPR015424 -
Amo08g0873 445 Pfam Aminotransferase class I and II 39 400 IPR004839 GO:0009058|GO:0030170
Amo08g0873 445 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0873 Amo-Chr8 14975864 14979600 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0873 K01762 - gmx:100803507 613.224