Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0771 ATGGCTGGTGTTGGGCGTGGAAATGGATACACAAATGGTGTGGTACCTAACAGGCACCCTGCTACAATATCTGAAGTAGATGAATACTGCAATGCACTTGGGGGAACAAGGCCAATTCATAGTATATTAATTGCAAACAATGGAATGGCCGCAGTCAAGTTTATACGYAGTGTGAGGAGCTGGGCTTATGAGACGTTTGGTACGGAGAAGGCTATCTTGTTGGTTGCCATGGCTACTCCAGAGGACATGAGAATCAATGCAGAACATATCAGAATAGCCGATCAATTTGTCGAAGTACCTGGTGGGACCAATAACAATAACTATGCCAATGTGCAGCTTATTGTAGAGATGGCTGAGATAACTCGGGTTGATGCTGTGTGGCCAGGTTGGGGTCATGCATCAGAAAATCCTGAGCTTCCAGATGCRTTAAAAGCAAAAGGAATTGTATTTCTTGGACCTCCAGCTGTATCTATGGCAGCACTGGGAGACAAAATTGGTTCATCATTGATTGCTCAAGCAGCAGAAGTGCCAACCCTTCCATGGAGTGGTTCTCATGTGAAAATTCCTCCCGATAGTTGCTTGGTTACTATTCCTGATGAAATTTACCGGGAAGCATGTGTTTATACAACAGAAGAAGCAATTGCCAGTTGTCAAGTTGTCGGTTACCCTGCAATGATCAAAGCATCTTGGGGTGGTGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTAAGGGCATTGTTCAAGCAAGTCCAAGGTGAAGTTCCGGGCTCACCTATATTTATAATGAAGGTTGCCTCCCAGAGCCGACATCTAGAAGTCCAGTTACTTTGTGATCAGTATGGAAATGTTGCAGCTTTGCATAGCCGTGATTGCAGTGTTCAAAGGAGGCACCAAAAGATTATTGAAGAGGGTCCCATTACTGTAGCTCCTCCACAAACGGTGAAACWACTAGAACAGGCAGCTAGAAGGTTGGCTAAATCTGTAAATTATGTTGGGGCTGCTACTGTTGAGTATCTTTTCAGTATGGAAACTGGCGAGTACTACTTTTTGGAATTGAACCCTCGACTACAGGTCTTGTACTTAAACCTTCATTTTGCTGACTATTTACTCTTTGAAAATGCTTCTGTTGAGCACCCTGTTACTGAGTGGATAGCGGAGATAAATCTGCCAGCAGCACAAGTTGCAATTGGGATGGGTATCCCTCTTTGGCAACTTCCTGAGATAAGACGTTTCTATGGGGTGGAACATGGTGGGGGGAATGATGCTTGGAGGAAAACATCAGCTTTGGCTACCCCTTTTGATTTTGACAAAGCACAATCCACAAAGCCAAAAGGTCACTGTGTGGCTGTGCGAGTGACAAGTGAGGACCCTGATGATGGTTTTAAGCCTACAAGTGGGAAAGTGCAGGAGCTTAGCTTTAAAAGCAAGCCAAATGTGTGGGCATACTTCTCTGTTAAGTCTGGAGGAGGAATACACGAGTTTTCAGATTCTCAGTTTGGGCATGTTTTTGCTTTTGGAGAATCTAGGGCTTTAGCTATAGCAAATATGGTTCTAGGGCTRAAGGAGATTCAAATTCGTGGAGAGATTCGTACCAATGTTGATTATACCATTGATCTTCTGAATGCTTCAGACTACAGAGACAACAAAATTCACACGGGATGGCTGGACAGTAGAATTGCGATGAGGGTTAGAGCAGAGAGGCCTCCCTGGTATCTTTCTGTTGTTGGAGGGGCCCTCTATAAAGCTTCTGCAAGCAGTGCAGCTCTGGTATCAGACTATGTTGGCTATCTGGAAAAGGGACAAATCCCTCCCAAGCATATATCTCTTGTGCATTCTCAAGTGTCCTTGAACATTGAAGGAAGCAAATACACRATTGACATGGTACGAGGAGGGTCTGGAAGTTATAGATTGAGAATGAATCAATCCGAAGTAGAAGCTGAGATACATACTTTACGTGATGGAGGTTTGCTGATGCAGGCAAGTATTTTGGATGGAAACAGTCATGTTATATATGCAGAGGAAGAAGCTGCTGGAACGCGCCTTCTAATTGATGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCGAAGTTAGTTGCAGAGACACCATGCAAGCTTATGAGGTATTTGGTTGTAGATGACAGCCATATTGATGCTGACACACCTTATGCTGAAGTTGAAGTCATGAAGATGTGCATGCCACTTCTTTCACCTGCTTCTGGGGTTATTCATTTCAAAATGTCTGAAGGTCAACCGATGCAGGCTGGTGAACTAATAGCAAGGCTTGATCTAGATGATCCTTCAGCAGTAAGAAAGGCAGAACCCTTCAATGGAAAATTCCCAGTCCTGGGCCCACCCACTGCAACTTCTGATAAAGTTCATCAGAAATGTGCTGCAAGCTTAARTGCTGCACAGATGATTCTTGCTGGTTATGAGCACAATATTGATGAGGTTGTGCAAAGTTTGCTCAATTGCCTTGATAGTCCTGAATTACCTTTCCTTCAATGGCAAGAGTGCTTTGCAGTTCTAGCAAACCGTCTTCCCAAAGATCTGAAAAATGAGTTGGAATCGAAATATAAGGAGTACGAGAGGATTTCAAGCTTCCAAGTKGTTGATTTCCCTGCCAAACTTTTGAAGGGAATTCTTGAAGCTCATTTGTCCTCATGTCCCAACAARGAAAAAGGGGCTCAAGAAAGGCTGATTGAACCTCTGTTGAGTCTTGTGAAGTCCTATGAGGGTGGAAGAGAGAGCCATGCTCGTAAAATTGTCCAATCCCTTTTTGAAGAGTATCTTTTTGTTGAAGAACTATTTAGTGATAATATACAGGCTGATGTAATTGAACGTCTCCGTCTTCAATATAAGAAAGATCTGTTGAAGATTGTGGATATAGTTCTCTCACATCAGGGTATCAAGAGYAAAAATAAGCTGATACTACGACTAATGGATAAACTGGTTTACCCMAATCCTGCTGCCTACAGGGATCAATTAATCCGCTTCTCTCAACTCAACCATACTAACTATTCTCAGTTGGCCCTWAAGGCAAGTCAATTGCTGGAACAAACTAAATTGAGTGAACTTCGATCCAACATTGCTAGAAGTCTTTCTGAGTTAGAGATGTTCACTGAGGATGGTGAAAATATTGATACTCCCAAGAGGAAAAGCGCTATTAATGACCGAATGGAGGACCTTGTTAGTGCTCCTTTGGCAGTTGAAGATGCTTTGGTGGGTTTATTTGATCACAGTGATCACACCCTTCAAAGAAGGGTTGTGGAAACTTATATACGCAGACTCTACCAGCCRTATCTTGTCAAAGGGAGTGTCAGAATGCAGTGGCACAGATCTGGTCTTATTGCTTCATGGGAGTTCTTAGAAGAGTACATTGAAAGRAAGAGTGGGGTTGAAGACCAAATGTCAGATAAAACGCTGGTGGAGAAACACACTGAGAAAAAATGGGGCGTAATGGTTGTAATTAAATCTCTTCACTTTTTGCCTGCAATTATCACTGCTGCGTTAAAGGAAGCAACCAAYAATCTTCATGAAGCAGTTTCAAGTGCTGCTGGTGAACCAGTTAAGCATGGTAATATGATGCATGTTGCATTAGTGGGCATCAACAACCAGATGAGTTTACTGCAAGACAGTGGTGACGAGGATCAGGCTCAAGAAAGAATCAATAAGTTGGCGAAAATACTAAAAGAAGAGGAAGTAGGCTCCACTATACGAGGTACTGGTGTTGGAGTAATTAGCTGTATCATACAGAGGGATGAAGGGCGTACCCCGATGAGGCACTCMTTTCACTGGTCAGCAGAAAAGCTCTATTATCAGGAGGAACCTCTGTTGCGTCATTTGGAACCACCGCTATCCATTTAYCTTGAATTGGACAAACTTAAAGGCTATGAGAACATACGGTATACTCCTTCTCGAGATCGTCAATGGCATCTGTACACTGTTATGGACCAAAAGCCTCAACCTGTTCAAAGAATGTTTCTTCGAACACTTTTAAGACAGCCAACCACAAATGAAGGATTCTCTTCGTATCAAAGGACGGATGCAGAAACACCTAGTACCGAATTGGCTATGTCCTTCACTTCAAGGAGCATTTTTAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATTCACACAATGCCACTATCAGACCTGAACACGCTCATATGTACCTCTATATTATACGCGAGCAGGAAATAAATGATCTTGTGCCTTATCCCAAGAGAGTTGACATAGATGCGGGCCAAGAAGAAACAACAGTTGAGGCAACCTTGGAAGAACTAGCACATGAAATCCATTCATCGGTTGGTGTAAGAATGCATAGATTAGGAGTTGTAGTTTGGGAAGTCAAGCTCTGGATGGCAGCCTGTGSACAGGCAAATGGCGCATGGAGGATTGTTGTAAACAATGTGACAGGTCATACATGCACTGTACATATATACCGAGAAATGGAAGATACCAATACYCATAGAGTGGTATACAGTTCAATCACYGTAAAGGGTCCACTGCATGGTGTACCTGTGAATGAAACTTATCAACCTTTGGGAGTTATTGATCGAAAACGTCTATCAGCAAGAAAGAACAGTACCACTTTTTGCTATGATTTCCCCCTGGCATTTGAAACAGCCTTGGAACAGTCGTGGGCAATCCAACAGCCGGGATTTCGAAGACCAAAAGATAAAAATCTGTTAAAGGTAACAGAGCTTAGATTTGCTGACAAAGAGGGTAGTTGGGGTACTCCTCTTGTTCCTGTGGAGCATTCTGCTGGACTCAATGATGTTGGSATGGTAGCTTGGTTTATGGACATGTGTACCCCCGAATTCCCATCCGGAAGGACAATATTGGTTGTAGCAAATGATGTGACATTCAAGGCTGGTTCTTTTGGCCCTAGAGAGGATGCATTCTTCCGTGCAGTTACTGATCTTGCATGTGCAAAAAAACTGCCTTTAATTTATTTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTTGCCGAGGAAGTCAAAGCCTGTTTTAAAGTTGGTTGGTCTGAGGAGTCCAACCCTGAGCATGGTTTTCAGTATGTATATTTAACACCTGAGGATTTTGCTCGGATTGGATCATCTGTGATTGCACACGAGCTAAAGCTTGAAAGCGGTGAAACCAGATGGATAATAGATACCATTGTTGGGAAAGAGGATGGCCTGGGGGTTGAAAACTTGAGTGGTAGTGGAGCCATTGCTGGTTCCTACTCAAGGGCATACAAGGAAACTTTCACATTAACATATGTGACTGGTAGGACTGTTGGAATAGGGGCTTATCTTGCTAGGCTTGGAATGAGATGCATACAGAGGCTTGATCAGCCTATAATTCTTACTGGTTTCTCAGCACTAAACAAACTTCTTGGTCGGGAGGTATACAGCTCTCACATGCAACTTGGTGGACCTAAAATCATGGCTACTAATGGAGTTGTACATCTTACAGTTTCAGATGACCTTGAAGGTGTTTCTGCTATTTTGAAGTGGCTTAGCTACATTCCTTCTCATGTAGGTGGCTCACTTCCCATCGTAAAGCCCCTTGACCCTCCTGAAAGACCAGTGGAGTACTTACCAGAAAATTCTTGTGATCCTCGTGCTGCTATTTCTGGAACTTTGGATGGTAATGGAAGATGGCTCGGTGGAATTTTYGACAAGGACAGCTTCGTGGAGACACTAGAAGGATGGGCAAGGACAGTCGTTACAGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGGATTGTTGCTGTAGAAACACAGACAGTGATGCAAATAATACCTGCTGATCCGGGCCAGCTTGATTCCCATGAGAGAGTTGTTCCTCAGGCTGGCCAAGTGTGGTTCCCTGATTCTGCTACTAAAACAGCCCAAGCAATAATGGATTTCAACAGAGAAGAGCTCCCACTTTTCATTCTAGCAAACTGGAGAGGCTTCTCTGGTGGTCAGAGGGACCTTTTCGAAGGAATTCTCCAGGCTGGTTCGACAATTGTGGAGAACCTTAGAACATACAAGCAGCCCATTTTTGTATACATCCCAATGATGGGTGAACTCCGTGGTGGAGCATGGGTTGTCGTTGACAGTCGGATCAATTCCGACCAYATTGAAATGTATGCCGACAGAACAGCTAAAGGAAATGTCCTTGAACCAGAAGGGATGATTGAGATTAAGTTTAGAACAAGGGAATTGTTGGAGTGCATGGGTAGACTTGATCAGAAGTTGATAACTCTGAAGGCAAAACTTCAGGAGGCTAAGGACAAGAGGGACACCGAGTCCTTTGAATCTCTACAGCAGCAGATTAAATCTCGCGAAAAACAGCTTTTGCCTCTGTATACCCAGATAGCTACCAAATTTGCTGAACTTCATGATACTTCCTTAAGAATGGCTGCTAAGGGGGTAATAAGACAAGTTCTGGACTGGGGTAACTCGCGCGCCGTCTTCTACCGGAGACTGTACAGGAGAATTGGTGAGCAGTCACTTATCAACAATGTGAGAGAAGCTGCTGGTGACCATTTGTCACATGTTTCCGCCATGGACTTGGTCAAAAACTGGTATTTGAGTTCCAACATTGCCAAAGGTAGAAAAGATGCTTGGCTGGACGATGAAGCCTTCTTCAGTTGGAAGGAAAATCCATYGAATTATGAGGATAAACTRAAGGAATTGCGTGCACAGAAAGTGTTGCTTCAATTGACAAACATTGGTGACTCGGTTCTAGATTTGCAAGCTCTGCCTCAAGGACTTGCTGCTCTTTTAAGCAAGTTGGAGCCATCGAGTCGGGTGAAGTTGGCGGAGGAACTTCGAAAAGTACTTGGTTAG 6846 0.435 MAGVGRGNGYTNGVVPNRHPATISEVDEYCNALGGTRPIHSILIANNGMAAVKFIRSVRSWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEMAEITRVDAVWPGWGHASENPELPDALKAKGIVFLGPPAVSMAALGDKIGSSLIAQAAEVPTLPWSGSHVKIPPDSCLVTIPDEIYREACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPPQTVKXLEQAARRLAKSVNYVGAATVEYLFSMETGEYYFLELNPRLQVLYLNLHFADYLLFENASVEHPVTEWIAEINLPAAQVAIGMGIPLWQLPEIRRFYGVEHGGGNDAWRKTSALATPFDFDKAQSTKPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLNASDYRDNKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKASASSAALVSDYVGYLEKGQIPPKHISLVHSQVSLNIEGSKYTIDMVRGGSGSYRLRMNQSEVEAEIHTLRDGGLLMQASILDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLMRYLVVDDSHIDADTPYAEVEVMKMCMPLLSPASGVIHFKMSEGQPMQAGELIARLDLDDPSAVRKAEPFNGKFPVLGPPTATSDKVHQKCAASLXAAQMILAGYEHNIDEVVQSLLNCLDSPELPFLQWQECFAVLANRLPKDLKNELESKYKEYERISSFQVVDFPAKLLKGILEAHLSSCPNKEKGAQERLIEPLLSLVKSYEGGRESHARKIVQSLFEEYLFVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGIKSKNKLILRLMDKLVYPNPAAYRDQLIRFSQLNHTNYSQLALKASQLLEQTKLSELRSNIARSLSELEMFTEDGENIDTPKRKSAINDRMEDLVSAPLAVEDALVGLFDHSDHTLQRRVVETYIRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEYIERKSGVEDQMSDKTLVEKHTEKKWGVMVVIKSLHFLPAIITAALKEATNNLHEAVSSAAGEPVKHGNMMHVALVGINNQMSLLQDSGDEDQAQERINKLAKILKEEEVGSTIRGTGVGVISCIIQRDEGRTPMRHSFHWSAEKLYYQEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVMDQKPQPVQRMFLRTLLRQPTTNEGFSSYQRTDAETPSTELAMSFTSRSIFRSLMAAMEELELNSHNATIRPEHAHMYLYIIREQEINDLVPYPKRVDIDAGQEETTVEATLEELAHEIHSSVGVRMHRLGVVVWEVKLWMAACXQANGAWRIVVNNVTGHTCTVHIYREMEDTNTHRVVYSSITVKGPLHGVPVNETYQPLGVIDRKRLSARKNSTTFCYDFPLAFETALEQSWAIQQPGFRRPKDKNLLKVTELRFADKEGSWGTPLVPVEHSAGLNDVGMVAWFMDMCTPEFPSGRTILVVANDVTFKAGSFGPREDAFFRAVTDLACAKKLPLIYLAANSGARLGVAEEVKACFKVGWSEESNPEHGFQYVYLTPEDFARIGSSVIAHELKLESGETRWIIDTIVGKEDGLGVENLSGSGAIAGSYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILKWLSYIPSHVGGSLPIVKPLDPPERPVEYLPENSCDPRAAISGTLDGNGRWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAIMDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIEIKFRTRELLECMGRLDQKLITLKAKLQEAKDKRDTESFESLQQQIKSREKQLLPLYTQIATKFAELHDTSLRMAAKGVIRQVLDWGNSRAVFYRRLYRRIGEQSLINNVREAAGDHLSHVSAMDLVKNWYLSSNIAKGRKDAWLDDEAFFSWKENPXNYEDKLKELRAQKVLLQLTNIGDSVLDLQALPQGLAALLSKLEPSSRVKLAEELRKVLG* 2282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0771 2281 Gene3D - 697 768 - -
Amo08g0771 2281 ProSitePatterns Biotin-requiring enzymes attachment site. 724 741 IPR001882 -
Amo08g0771 2281 Gene3D - 1519 1846 - -
Amo08g0771 2281 Gene3D Biotin dependent carboxylase carboxyltransferase 1669 1733 - -
Amo08g0771 2281 ProSiteProfiles ATP-grasp fold profile. 191 388 IPR011761 GO:0005524|GO:0046872
Amo08g0771 2281 SUPERFAMILY Rudiment single hybrid motif 447 560 IPR011054 -
Amo08g0771 2281 Pfam Carboxyl transferase domain 1613 2165 IPR034733 -
Amo08g0771 2281 Pfam Biotin carboxylase C-terminal domain 453 559 IPR005482 -
Amo08g0771 2281 SUPERFAMILY ClpP/crotonase 1524 1847 IPR029045 -
Amo08g0771 2281 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Amo08g0771 2281 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 11 2280 - -
Amo08g0771 2281 CDD biotinyl_domain 702 766 - -
Amo08g0771 2281 Pfam Biotin-requiring enzyme 702 766 IPR000089 -
Amo08g0771 2281 SUPERFAMILY Single hybrid motif 699 769 IPR011053 -
Amo08g0771 2281 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Amo08g0771 2281 Gene3D - 1851 2250 - -
Amo08g0771 2281 SUPERFAMILY ClpP/crotonase 1852 2242 IPR029045 -
Amo08g0771 2281 ProSiteProfiles Biotin carboxylation domain profile. 38 563 IPR011764 -
Amo08g0771 2281 Gene3D - 269 545 - -
Amo08g0771 2281 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1861 2176 IPR011763 GO:0016874
Amo08g0771 2281 Gene3D - 11 163 - -
Amo08g0771 2281 SUPERFAMILY PreATP-grasp domain 18 161 IPR016185 -
Amo08g0771 2281 Coils Coil 2077 2097 - -
Amo08g0771 2281 PANTHER BNAC06G01580D PROTEIN 11 2280 - -
Amo08g0771 2281 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 361 IPR005479 GO:0005524
Amo08g0771 2281 Pfam Acetyl-CoA carboxylase, central region 767 1511 IPR013537 GO:0003989|GO:0005524|GO:0006633
Amo08g0771 2281 Gene3D - 206 268 IPR013815 GO:0005524
Amo08g0771 2281 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 418 - -
Amo08g0771 2281 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1518 1857 IPR011762 -
Amo08g0771 2281 SMART Biotin_carb_C_2 452 559 IPR005482 -
Amo08g0771 2281 Gene3D - 164 204 - -
Amo08g0771 2281 ProSiteProfiles Biotinyl/lipoyl domain profile. 693 767 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0771 Amo-Chr8 13597683 13609298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0771 5 2281 Acyl Lipid Metabolism Gene Families AT1G36160 80.877 0.0 3841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0771 K11262 - gmx:100778658 4147.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0771 08 13597683 13609298 Amo17g2795 17 129496447 129509993 hybridization