Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0719 ATGCATCCTTTTTGCTGCGTATCCGCCGTCTCCGACCAGTCTTCTCCGGTAAAACCTACGCCCGCGGCTCACTTCGCGGACTTCACCATGCCTCCTCTCCCCTCCGCTGCCGTCAGATCCGATTCAGCCCCACGCCACAGTCATAGCCACAGTTACGGCAGCAACCACTCCGCCGGCGGTGGCAGCAGCAGCAACAACAACCACAACAACAACAACAATAATAACAACGGAGACCACGGGCGGGGGAGCCAGCAACAACAGCAGCGGGAGCAACCGCCGCCGCCGGTGGTGGTTGATGTGAAGATCAACGACCTCGTCGGAAATGGAATCTCGGGAATACTGTACAAGTGGGTGAATTATGGCAAAGGATGGAGGCCACGGTGGTTCGTGCTCCAAGACGGCGTTCTCTCCTACTATAAGATTCACGGTCCTGATAAGATCGTCGTGAATCCCGAGACCGAGAAGGGCTCCAAGGTCATCGGCGAGGAATCCATGCGCAGGATCTCTCGCAACCGCAATTCCCAATCCCAACACCACCGTCGAAAGCCCTTCGGTGAAATCCACCTCAAGGTTTCGACGATTCGAGAGAGCAAATCCGATGATAAGAGGTTTTCGGTGTTCACGGGAACGAAGAGGATGCACCTGAGGGCAGAGACGAGAGAGGATCGGACGGCGTGGATGGAGGCGCTGCAAGCGGTGAAGGACATGTTCCCAAGGATCTCGAACAGCGAGCTGATGGCGCCGGTGGACAATGTGAGCGTCTCGACGGAGAAGCTGAGGCAGAGGCTTCTAGAAGAACGGGTGAGTGAGGCTGCCATTCAGGATAGCGAGCAGATCATGAGGACAGAGTTTGCGGCGCTGCAGAACCAGCTTAAGCTCCTCAAGCAGAAGCAGTCAATGCTCATTGACACATTGCGCCACTTAGAGACAGAAAAGGTCGATCTGGAAAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGACTTCCTCCACATTAAGGCAGGAAAAATCTAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAACGAGAGAAATGATGCTGCAGAAGAAGAAACAGATGATGAAGACAATGCCTTTTTTGACACCCGCGATTTTCTATCGTCCAGTTCTTTCAAAAGTAATGGGTCTGATTATAGAGTATCATCTTTCTCTTCTGATGATGATGGGTTCTATGCATTCGAATCGGAGGATGATGTAGATCCAGCCATTAGATCTGTTGGAAGCAACTACCCTCATGTTAAGCGGCGTAAGAAATTGCCTGATCCTGTAGAGAAAGAGAAAGGTGTGAGTCTCTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACTAAAGTTTGCCTCCCTGTTTATTTTAATGAGCCACTCTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAATATTCACATCTGCTGGACCAAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGGATTCTCTGTGTTGCTGCTTTTGCTGTATCTGGTTATGCTTCAACTGATGGAAGAGTTTGCAAACCATTTAATCCATTACTCGGGGAAACATATGAAGCTAATTTTCCAGACAAAGGCCTTCGATTTTTCTCAGAAAAGGTCAGTCATCACCCAATGATAGTTGCGTGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTCGGTACTTTGACCTTGGAATTTGAGGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACTACATCAATATACAATCTTATATTAGGAAAGCTGTACTGTGATCACTATGGAACAATGCGTATACAGGGAAACCAAGAATATTCATGTAAGCTGAAATTCAAGGAACAGTCTATAATTGATCGAAATCCTCACCAGGTCCATGGTATCGTTCAAGATAGGAATGGAAAAACAGTATCTACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAACGGAGACTACAGTGCAAAGGGAAAAGCTCACGAATCCTTATCAGAAGCCCGACTACTCTGGAAGAGAAGCAAGCCTCCCAAATTTCCCACTAGATATAACTTCACTCGTTTTGCCATCACATTAAATGAACTTACCCCTGGGTTGAAGGAAAAGTTGCCACCGACTGATTCCAGGTTAAGACCAGACCAAAGGTATCTGGAAAACGGGGAATATGAGATGGCAAATTCAGAAAAGTTACGGCTAGAGCAGAGGCAGCGACAGGCTCGGAAGATGCAAGAGAGGGGTTGGAAACCGCGGTGGTTTGCCAAGGATAAAGCAACCGGCACATACCGATACCTAGGAGGATATTGGGAGTCCCGAGAAGAAGGCACCTGGGACTCCTGTCCTGACATCTTTGGCCAAATTCCTTCAGACCATCTTTCCGACGAAGGTCAAACTGCATCTTAG 2472 0.4786 MHPFCCVSAVSDQSSPVKPTPAAHFADFTMPPLPSAAVRSDSAPRHSHSHSYGSNHSAGGGSSSNNNHNNNNNNNNGDHGRGSQQQQQREQPPPPVVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGEESMRRISRNRNSQSQHHRRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRMHLRAETREDRTAWMEALQAVKDMFPRISNSELMAPVDNVSVSTEKLRQRLLEERVSEAAIQDSEQIMRTEFAALQNQLKLLKQKQSMLIDTLRHLETEKVDLENTVVDESQRQWNDQETSSTLRQEKSSEGSASESEDDNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDDGFYAFESEDDVDPAIRSVGSNYPHVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSHLLDQAYEWGRRGNSLMRILCVAAFAVSGYASTDGRVCKPFNPLLGETYEANFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFEDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVSTLFGKWDESMHYVNGDYSAKGKAHESLSEARLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQERGWKPRWFAKDKATGTYRYLGGYWESREEGTWDSCPDIFGQIPSDHLSDEGQTAS* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0719 823 MobiDBLite consensus disorder prediction 47 92 - -
Amo08g0719 823 Gene3D - 738 801 - -
Amo08g0719 823 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 64 814 - -
Amo08g0719 823 Coils Coil 746 769 - -
Amo08g0719 823 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 64 814 IPR000648 GO:0008289
Amo08g0719 823 MobiDBLite consensus disorder prediction 803 823 - -
Amo08g0719 823 MobiDBLite consensus disorder prediction 353 369 - -
Amo08g0719 823 MobiDBLite consensus disorder prediction 323 370 - -
Amo08g0719 823 SUPERFAMILY Oxysterol-binding protein-like 436 815 IPR037239 -
Amo08g0719 823 SMART PH_update 108 237 IPR001849 -
Amo08g0719 823 MobiDBLite consensus disorder prediction 323 342 - -
Amo08g0719 823 Gene3D - 527 701 - -
Amo08g0719 823 SUPERFAMILY PH domain-like 110 235 - -
Amo08g0719 823 MobiDBLite consensus disorder prediction 36 95 - -
Amo08g0719 823 Gene3D - 108 237 IPR011993 -
Amo08g0719 823 Pfam Pleckstrin homology domain 115 231 - -
Amo08g0719 823 Coils Coil 305 325 - -
Amo08g0719 823 Pfam Oxysterol-binding protein 441 796 IPR000648 GO:0008289
Amo08g0719 823 CDD PH_ORP_plant 110 242 - -
Amo08g0719 823 Coils Coil 277 297 - -
Amo08g0719 823 ProSiteProfiles PH domain profile. 107 235 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0719 Amo-Chr8 12743378 12749406 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0719 K20456 - gmx:100137077 1351.65