LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo08g0665	ATGGTGGCATGTCTCTGCACGTGCCACCTCGTTTACACCGCGATGAATCTTTCCGCCTCCGCCGCCGTAGCATCCTCACTTTCTCTTCTCTCTTCTTTCTCCTTCCTCAATCCCAATCCCAGTCCCAGTCCCAAAACCTTCGCTTTCGGCTTCCGGTTCAAGACGAAGGGTAGGAGTACCCGCGGAGTGAGGCGTCCCAAGTCTCTCGTCACCGCCCAACTTTCCAACTCCTTTTCCTTCAGTTTCGGGTTGGATTCTCAGAGTTTGAATGATATCCAATCCCATGATCCGTCACAATTGCCTTGGGTGGGTCCGGTTCCGGGTGATATTGCTGAAGTGGAGGCATACTGTAGGATCTTTAGGAATTATGAAAGGCTTCATTCCTCATTAATGAACGTGTTGTGCAATCCACTAACCGGTGAATGTAGTGTTTCCGATGAAGTTCCATCGGATGAGAGGCTGCCTGTAGAAGATAAGATTGTTTCGGTCCTTGGGTGCATGGTAGCACTTGTGAACACCGCGAGGGACGATGTTCTTTCTGGAAGAAGGTCTTCGGTTATGACCCCCTTTCGTGTGGCAGGGGTTGGCGTGATGGAGGACGTGGTGCCCCCACTTGCTGCTTTTAGGAGTGAGATGAAGAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAACTATTTAGTTCCAGGTGACAATCCAAGGTTGGATGCGTGGAGGAAACTTCAGAGATTGAAGAATGTATGCTATGATGCTGGTTTTCCGCACAGGGAGGAAGATCCATGTCCAGAACTGTTTTCGAATTGGAGTCCTGTATATTTATCTGCTCCCAAAGAAGACACAAAATTGAACGACTCTGAAGCAGGATTTTGGACAGGCGGGCAGGTAACTGAAGAAGGCCTAAAGTGGTTGCTGGATAATGGATATAAAACTATCATAGATCTTAGACAAGAGGCAGTAAAAGATAATTTATATCATGAAGCTGTTAATGATGCTATTTCATCTGGAAAAATTGAATTGGTCAAAATCCCTGTTGATGTTCAGAGAGCACCTACAATGGAACAGGTTGAGAGGTTTGCATCTTACGTTTCAAATTACAGGAAACGGCCAATCTATCTTCATAGTCAGGAAGGAGTTTGGAGAACGTCTGCCATGGTCTCTAGATGGAGGCAGTATATGACTCGATTTGCATCATCATTTGTTTCTAATGAAGCAGTTACTTCCAGTGAAAGGCCATCAGATTATACAAATGGATCTGCGAAACTGCATGACTCTTCAATAGAATCTGAGAGATCCAGATCCTCTGCAGAAACGGATGACAATTTGTTGCAAGAGAGTTTGGGTGCAGTTACTCCTAATTCTTCACGAGTGATTACTGGCAGTGAGAACAATGCTTCTATGAATTTCTCCAGCAAAACTATCCCTTTAGAAGCTCAAATCCCTCCTCGTGACATCTTCTCCAAAAGAGAGATGTCCAGATTTTGGAGAAATAGAAAGATCCCAGGACCCTCTTATTTCAATTATAAGGTTGAAAGTTTAGAATGTTTGACAGATTCCAGGAACATGCATGCTGGAAGACCACAGGGGAAAGTGACTATCAGCAATGGAGATAATCCCGTCGCTGAAATTGTGGATCGGGAAAGTTTGAATGGGTCACCTCGTGTGGACTATCCATCTGGAGAGCCTCCAATCACAGTTGGTGGCGACTGGAAGTCAGTGAATGGGAGTACTTCGAACTTTGGGAAGACAACAGTTTATGAGTTAAGTGAAGGAGATGTGCGCTACATGAATAATAGCAATGTCACAATGACTAAGTCTCAAAGTGATGATGGTAAGGCTGGGTTAGCCTTACATGATGAAGACTTGGGACTCATGGAGGGAGACATGTGTGCATCCTCAACTGGAGTTGTAAGGGTGCAATCAAGAAAGAAAGCTGAGATGTACCTAGTACGGACTGATGGCGTTTCTTGTGAGAGAGAAAAGGTGACTGAATCTTCTTTGGCCTTCACTCACCCTAGCACCCAGCAACAGATGCTTATGTGGAAATCTACACCGAAGACTGTGTTATTGCTGAAAAAGCCCGGGGAGCAACTCATGGAAGAAGCTAAAGAGGTTGCTTCCTTTCTGTATTACCAAGAGAAAATGAACATTTTTGTGGAACCTGATGTGCATGATATATTTGCTAGACTTCCTGGATTTGAATTTATTCAAACCTTCTATATCCAAGATACTAGTGTTCTGCATGAGAAAGTAGATTTTGTGGCTTGTTTGGGAGGAGATGGTGTTATTCTGCATGCTTCAAATCTATTTGGAGGCGCTATTCCTCCTGTTGTGTCATTTAACCTTGGTTCCCTTGGTTTCCTGGCTTCTCATAGTTTTGAAGACTACAGGCAGGACTTACGACAAGTCATCCATGGAAATAACACTGGAGATGGTGTATACATAACTCTTAGAATGCGTCTAAGATGTGAAATTTTTCGTAAGGGTAAAGCAATGCCAGGGAAAGTGTTTGATATTCTTAACGAGGTTGTTATTGATCGGGGTTCTAATCCATATCTTTCAAAGATCGAATGTTATGAACATGACAGACTTATAACCAAGGTACAAGGTGATGGAGTCATTGTGGCCACCCCAACGGGAAGCACTGCTTATTCTACAGCTGCTGGAGGTTCCATGGTGCATCCAAATGTTCCTTGCATGCTATTTACCCCGATTTGTCCGCATTCACTCTCATTTAGACCAGTTATACTTCCAGATTCTGCTCGACTAGAATTAAAGATTCCGGAAGACGCAAGAAGCAATGCTTGGGTATCATTTGATGGGAAGAGAAGGCAGCAACTTTCTCGGGGAGATTCTGTACGAATATCCATGAGTCAGCACCCACTTCCAACTGTTAACAAGTTCGATCAAACCGGTGATTGGTTTCACAGCTTGATTCGCTGCCTGAATTGGAACGAAAGACTTGATCAAAAGGCCCTATGA	2979	0.4421	MVACLCTCHLVYTAMNLSASAAVASSLSLLSSFSFLNPNPSPSPKTFAFGFRFKTKGRSTRGVRRPKSLVTAQLSNSFSFSFGLDSQSLNDIQSHDPSQLPWVGPVPGDIAEVEAYCRIFRNYERLHSSLMNVLCNPLTGECSVSDEVPSDERLPVEDKIVSVLGCMVALVNTARDDVLSGRRSSVMTPFRVAGVGVMEDVVPPLAAFRSEMKRCCESLHVALENYLVPGDNPRLDAWRKLQRLKNVCYDAGFPHREEDPCPELFSNWSPVYLSAPKEDTKLNDSEAGFWTGGQVTEEGLKWLLDNGYKTIIDLRQEAVKDNLYHEAVNDAISSGKIELVKIPVDVQRAPTMEQVERFASYVSNYRKRPIYLHSQEGVWRTSAMVSRWRQYMTRFASSFVSNEAVTSSERPSDYTNGSAKLHDSSIESERSRSSAETDDNLLQESLGAVTPNSSRVITGSENNASMNFSSKTIPLEAQIPPRDIFSKREMSRFWRNRKIPGPSYFNYKVESLECLTDSRNMHAGRPQGKVTISNGDNPVAEIVDRESLNGSPRVDYPSGEPPITVGGDWKSVNGSTSNFGKTTVYELSEGDVRYMNNSNVTMTKSQSDDGKAGLALHDEDLGLMEGDMCASSTGVVRVQSRKKAEMYLVRTDGVSCEREKVTESSLAFTHPSTQQQMLMWKSTPKTVLLLKKPGEQLMEEAKEVASFLYYQEKMNIFVEPDVHDIFARLPGFEFIQTFYIQDTSVLHEKVDFVACLGGDGVILHASNLFGGAIPPVVSFNLGSLGFLASHSFEDYRQDLRQVIHGNNTGDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVIDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL*	993

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo08g0665	992	MobiDBLite	consensus disorder prediction	406	469	-	-
	Amo08g0665	992	MobiDBLite	consensus disorder prediction	406	422	-	-
	Amo08g0665	992	MobiDBLite	consensus disorder prediction	438	469	-	-
	Amo08g0665	992	Gene3D	-	819	959	IPR017437	GO:0003951\|GO:0019674
	Amo08g0665	992	Hamap	NAD kinase [nadK].	685	983	IPR002504	GO:0003951\|GO:0006741
	Amo08g0665	992	PANTHER	NAD KINASE	572	992	-	-
	Amo08g0665	992	PANTHER	NAD KINASE	51	463	-	-
	Amo08g0665	992	MobiDBLite	consensus disorder prediction	423	437	-	-
	Amo08g0665	992	Gene3D	Protein tyrosine phosphatase superfamily	278	410	IPR029021	-
	Amo08g0665	992	Pfam	ATP-NAD kinase C-terminal domain	839	965	-	-
	Amo08g0665	992	Gene3D	-	674	984	IPR017438	-
	Amo08g0665	992	SUPERFAMILY	NAD kinase/diacylglycerol kinase-like	688	987	IPR016064	-
	Amo08g0665	992	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	287	391	IPR029021	-
	Amo08g0665	992	Pfam	ATP-NAD kinase N-terminal domain	746	805	IPR002504	GO:0003951\|GO:0006741
	Amo08g0665	992	PANTHER	NAD/NADH KINASE FAMILY PROTEIN	51	463	-	-
	Amo08g0665	992	PANTHER	NAD/NADH KINASE FAMILY PROTEIN	572	992	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo08g0665	Amo-Chr8	11836642	11841688	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo08g0665	K00858		-	gmx:100796381	1343.56

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo08g0665	08	11836642	11841688	Amo17g2695	17	127330628	127331759	hybridization