Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0650 ATGCCAGCTTCTTCTCCTTCAGAGAACCGCACAAAATGGAGGAAGCGGAAGAGGGAATCGCAAATCAGTCGCCGCCACCAGAAGCACCAGCACCACCACGAAGACGACGACGATGAAGAAGAAGAGAACCCCAATGCCGACAACAACGAAGACCACGACGACGATTCTGAGGACCAAACCCCTAATCCCCTATCTGCTTCCCCTCACCACCACGAGATCGAGGTGCTCTCCGATCACGCCGTCCAGATTTCGCATTTCCCCACTGTTCTCAAGCGCTCCGTTAACCGCCCACACTCCTCCGTCGCCACCGTCATCGCTCTCGAGCGCGCCGCACTCGCCGGCGACTCCAAGGCCCACCAACAGCTCCACAACAGCGGCAGCATTCCGTTCCTCGAGAATGTTTCTCACGGCCAGCTCCAGGCCCTCTCCACCGTCCCGGCTGACAGCCCCTCCCTCGATCATGACCGCGACGGCGGCAGCAGCAGCTCCTCTTTTGTTATCACTCCTCCGCCAGTTTTGGAAGGACGTGGTGTTGTTAAGCGCTTTGGAAATAGGGTTCTTGTTGTTCCAATGCATTCAGATTGGTTTTCACCAGCCACAGTGCATCGTCTAGAGAGACAAGCAGTGCCGCATTTCTTTTCTGGAAAATCACCAGGTCATAGTCCGGAGAAGTATATGGAGTGCAGGAACTATATTGTTGGGCTCTACATGGAGGACCCTGGGAAGAGGATTACTGTCTCTGATTGTCAGGGATTGTTGGTTGCAGTTGACAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCATTGGGGAATCATCAATTACTGTGCTTTGGAGTCATGTCATGCGCCATTTAATGATGCATCCTTCCTGAAGGAGGAGACAAGTGGAGAAGTCCGCGTGCCCTCAGAGTTTCTAAAATCCATAGATAGTCTGATAAGTTTTGACAAGCCCAAGTGTAAGGTCAAAGCAGAAGAAATTTATTCATCATTCACAATGCACAATGCTGATGTCACTGATCTGGACAACAGGATACGGGAACATCTATCCGAAAATCATTGCCATTGTTGTTCTCGTCCACTTCCTGCTGTACACTATCAGTCACAAAAAGAGGTTGATATTTTACTTTGTACTGGCTGCTTTCATGATGGGAGATTTGTCGTTGGACATTCAAGTATAGATTTTGTTAGGGTGGATTCGTCCAGGGATTATGGTGAGGGAGATGGGGATAGTTGGACTGATCAAGAAACTCTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCCGAACATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGATGGAAAATTGGAAAATATCAACATTCCAAGCGTGTCTTTGCCATCCAATGTGATGAATAGAAATGATAGTGGAAGAATGCATGGCTACGTAAACGGAGATTCTGCAGGAACTGTCCGCCAAAGCAGAGATTCTGACAGCAGGTTTCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTTTGGTAGCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATACTTCTGGCAGCACATCGCAAATGGAAGTACAAGGACATGATAATAGGTCAAATTCAGAAAGTGCACATAGTAGAGATCGTGGAGAAACTGCAATTTCAAATAATCATAATGAGGACAAGGCAAAACTTGTTGGTTCACGAGGTCAAAATGAAGGCGGGACAACACCACTATCTGTTGAGAAAGTTCAAGATGCAGCAAAGGCAGGCCTCTCTGCTGCAGCCATGAAATCTAAATTGTTTGCTGATCATGAAGAACGAGAAATCCAGAGGCTATGTGCTAGTATCGTTAGTCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCTGAAATTGAAACATTATTGATGAAAGAATGTGAACAAGTTGAGAGGACAAGGCAGAGATTTGCTGCTGAGCGGTCCCGTATTATATCTGCTCGTCTTGGAACTGGAGGAGCCACACCTCCACCGTCAGGTGTTGGTCCTTCCATGTCTAACAGTAATGGCAACAGTAGGCCACAAATGATCTCTGCGTCTCCCTCGCAGCCCAGCATCTCGGGGTATGGCAACAACCAACCAGTTCATCCACACATGTCCTTTGCCCCGAGACCTTCTATGTTTGGTTTGGGACAAAGACTGCCCCTATCTATGATACAACAATCTCAATCACCTTCAAATGCCATGTTCAATGCCCCTAGTAATGTGCAACCCACTTCCAATCATCCATTGTTGAGGCCTGTATCAGGGACTAACTCTGGTTTAGGTTAA 2388 0.4715 MPASSPSENRTKWRKRKRESQISRRHQKHQHHHEDDDDEEEENPNADNNEDHDDDSEDQTPNPLSASPHHHEIEVLSDHAVQISHFPTVLKRSVNRPHSSVATVIALERAALAGDSKAHQQLHNSGSIPFLENVSHGQLQALSTVPADSPSLDHDRDGGSSSSSFVITPPPVLEGRGVVKRFGNRVLVVPMHSDWFSPATVHRLERQAVPHFFSGKSPGHSPEKYMECRNYIVGLYMEDPGKRITVSDCQGLLVAVDKEDLARIVRFLDHWGIINYCALESCHAPFNDASFLKEETSGEVRVPSEFLKSIDSLISFDKPKCKVKAEEIYSSFTMHNADVTDLDNRIREHLSENHCHCCSRPLPAVHYQSQKEVDILLCTGCFHDGRFVVGHSSIDFVRVDSSRDYGEGDGDSWTDQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINIPSVSLPSNVMNRNDSGRMHGYVNGDSAGTVRQSRDSDSRFPFANSGNPVMALVAFLASAVGPRVAAACAHAALAVLSEDTSGSTSQMEVQGHDNRSNSESAHSRDRGETAISNNHNEDKAKLVGSRGQNEGGTTPLSVEKVQDAAKAGLSAAAMKSKLFADHEEREIQRLCASIVSHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSRIISARLGTGGATPPPSGVGPSMSNSNGNSRPQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSPSNAMFNAPSNVQPTSNHPLLRPVSGTNSGLG* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0650 795 MobiDBLite consensus disorder prediction 545 602 - -
Amo08g0650 795 Gene3D - 193 279 IPR036388 -
Amo08g0650 795 ProSiteProfiles Myb-like domain profile. 412 455 IPR001005 -
Amo08g0650 795 CDD SANT 412 454 IPR001005 -
Amo08g0650 795 Pfam SWIRM-associated region 1 613 688 IPR032451 -
Amo08g0650 795 MobiDBLite consensus disorder prediction 561 590 - -
Amo08g0650 795 ProSiteProfiles Zinc finger ZZ-type profile. 349 404 IPR000433 GO:0008270
Amo08g0650 795 Pfam SWIRM domain 190 276 IPR007526 GO:0005515
Amo08g0650 795 PANTHER SWI/SNF COMPLEX-RELATED 63 794 - -
Amo08g0650 795 Pfam Myb-like DNA-binding domain 412 454 IPR001005 -
Amo08g0650 795 SMART sant 409 457 IPR001005 -
Amo08g0650 795 MobiDBLite consensus disorder prediction 1 68 - -
Amo08g0650 795 Gene3D - 409 459 - -
Amo08g0650 795 ProSiteProfiles SWIRM domain profile. 187 285 IPR007526 GO:0005515
Amo08g0650 795 MobiDBLite consensus disorder prediction 37 57 - -
Amo08g0650 795 SUPERFAMILY Homeodomain-like 186 282 IPR009057 -
Amo08g0650 795 MobiDBLite consensus disorder prediction 688 737 - -
Amo08g0650 795 SUPERFAMILY Homeodomain-like 410 463 IPR009057 -
Amo08g0650 795 MobiDBLite consensus disorder prediction 145 166 - -
Amo08g0650 795 MobiDBLite consensus disorder prediction 760 795 - -
Amo08g0650 795 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 63 794 - -
Amo08g0650 795 ProSiteProfiles SANT domain profile. 408 459 IPR017884 -
Amo08g0650 795 MobiDBLite consensus disorder prediction 699 733 - -
Amo08g0650 795 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0650 Amo-Chr8 11619509 11624234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0650 355 451 EF-hand Containing Proteins AT3G07740 32.075 1.39e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0650 K11649 - gmx:100780440 1165.98