Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0642 ATGAAAATTCTCACTTCTTCAACTTTATTCGTATTAATTTTTCTTTCACCAATAGTTTTATCGGCTAAACAAATTCCTTCTACAGTGTACAATAGTCTCCTATTTTCGGGCCACAAAGAGAGTGTTCCGCCATCATCTGAAGCCGCCATCAACAAGAGCAACAACGCCACACATCGCACAACAGAATCTGTAGAGGACATCGATGATGGAGAAGACTGTGAATCTTCATGGAATAAGGCATGTTCAGAAGCGGTGCTGAAGGTTGCACGTCAGCCGGAGACAGTGGATTGGCTCCGGAAGGTACCAAGAAGGATCCATCAAAATCCTGAGCTGGCTTTTGAAGAAATCGAAACAAGTCGCTTAATAAGAAAAGAACTGGATCTGATGAGAATTAGTTATCGATATCCACTGGCTAAAACAGGTGTTCGTGCGTGGATCGGCACTAATGGTCCACCTTTTGTTGCCATCAGAGCTGACATGGATGCACTTCCCATACAGGAAGCTGTGGAATGGGAATACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGATGCACATGTGGCCATGCTTATGGGTGCTGCCAAAATATTGAAAAGTCGAGAACATTTGTTGAAGGCCTTGCTCTTATGGCAGGGAACTGTAATTCTGATATTCCAACCAGCGGAGGAAGCTGGAAATGGTGCAAAGAGAATGATACAAGATGGTGCATTGGAGGATGTTGAGGCTATATTTGCAGTTCATGTATCCCATCAGCATCCAACCGCTATTATTGGGTCCAGGCCCGGCCCATTGCTGGCTGGCTGTGGTTTTTTTAGAGCCGTGATCACAGGGAAAAAAGCACTCGCCGGCGATCCACACCACTCGATCGATCCGGTTTTGGCCGGTTCAGCCGCTGTGATCAGCTTGCAGGGTATTGTCTCCCGCGAATCCAATCCCTTGGATTCACAGGTTGTTTCTGTGACTTCATTCAATGGAGGCAACAATCTTGATATGATACCAGACACAGTGGTTCTTGGTGGAACTTTCAGAGCTTTCTCTAACACCAGCTTTTATCAACTACTTGAAAGAATTGAGCAGGTGATTGTGGAACAAGCCGGTGTGTATAGATGCTCTGCAGAGGTTGACTTCTTTGAAAAGGAGTACACCATATATCCTCCAACAGTCAATGATGACAAAATGTATGAGCATGTGAAGAAGGTTTCCATTGATTTGCTGGGTCAAACGAATTTCAAGGTAGTTCCACCCATGATGGGTGCTGAAGATTTCTCATTCTACTCCCAGGTGGTCCCTGCAGCATTCTTCTACATAGGGATAAGGAATGAGACATTGGGGTCTACTCACACAGGACACTCCCCACATTTCATGATTGATGAAGATGTTCTACCAATAGGTGCAGCAGCACATGCCACCATTGCAGAGAGGTTCCTCATTGAGTACGGGTGA 1452 0.4545 MKILTSSTLFVLIFLSPIVLSAKQIPSTVYNSLLFSGHKESVPPSSEAAINKSNNATHRTTESVEDIDDGEDCESSWNKACSEAVLKVARQPETVDWLRKVPRRIHQNPELAFEEIETSRLIRKELDLMRISYRYPLAKTGVRAWIGTNGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLMGAAKILKSREHLLKALLLWQGTVILIFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQHPTAIIGSRPGPLLAGCGFFRAVITGKKALAGDPHHSIDPVLAGSAAVISLQGIVSRESNPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQAGVYRCSAEVDFFEKEYTIYPPTVNDDKMYEHVKKVSIDLLGQTNFKVVPPMMGAEDFSFYSQVVPAAFFYIGIRNETLGSTHTGHSPHFMIDEDVLPIGAAAHATIAERFLIEYG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0642 483 TIGRFAM amidohydrolases: amidohydrolase 99 467 IPR017439 GO:0016787
Amo08g0642 483 SUPERFAMILY Zn-dependent exopeptidases 93 480 - -
Amo08g0642 483 MobiDBLite consensus disorder prediction 42 69 - -
Amo08g0642 483 Pfam Peptidase dimerisation domain 274 368 IPR011650 -
Amo08g0642 483 PANTHER PEPTIDASE M20 FAMILY MEMBER 51 482 IPR017439 GO:0016787
Amo08g0642 483 CDD M20_IAA_Hyd 98 479 IPR044757 GO:0009850|GO:0016787
Amo08g0642 483 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 51 482 - -
Amo08g0642 483 Gene3D Zn peptidases 101 472 - -
Amo08g0642 483 SUPERFAMILY Bacterial exopeptidase dimerisation domain 270 379 IPR036264 -
Amo08g0642 483 Pfam Peptidase family M20/M25/M40 155 476 IPR002933 GO:0016787
Amo08g0642 483 Gene3D - 269 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0642 Amo-Chr8 11489854 11497643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0642 K21604 - gmx:100785666 733.791