Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0641 ATGCTAATGGCTTCAGCCATCGCTAACGCCCAATTCACCATCATCAACCCTTCTTCTTCTTTCGATTCCCACGGATACATTGGTCTCAGGCCCACCCAACCTTCCAATTTGAAGCTCTCTTCTAACCGCACCACTTCAACCAACCTTCTTCGCCCTCTCCACCTCTTCGCCGTTAGAGCAAGTGATTCCCACAACGGTAACCAAGCGGGTCCACTCCACAAGCTTGGCCTCTCCGACGCCGAATGCGAAGCCGCCGTTGTTGCCGGTAACGTCCCGGAGGCACCTCCGGTTCCCCCTAAACCGGCTTCTCCGGTTGGAACTCCCGTCGTCCCTTCACTTCCACTTAACAGGCGTCCTCGCCGCAACCGGAGGACGCCGGCGCTGAGGGAAGCATTTCAGGAGACGACAATATCGCCTGCGAATTTCGTGTATCCACTTTTCATTCATGAAGGTGAGGAGGACACTCCAATTGGGGCTATGCCGGGATGCTATAGGCTTGGATGGAGGCATGGACTTGTGCAAGAGGTTGCAAAGGCACGGGATGTTGGTGTTAATAGTGTGGTGCTTTTTCCTAAAATTCCAGATGCCTTGAAGTCTCCCACAGGGAATGAAGCATACAATGATAATGGTTTAGTGCCTCGGTCAATACGTTTGCTCAAGGATAAGTTTCCAGACCTTGTTATCTATACAGATGTTGCACTAGATCCTTATTCATCAGATGGGCATGATGGTATAGTTAGAGAGGATGGAGTTATTATGAATGATGAGACTGTTCATCAATTATGCAAACAAGCTGTATCCCAGGCCCGAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTGGGAGCAATGCGAGCAGCTCTTGATGCTGAAGGCTTTCATCATGTTTCTATAATGTCCTACACAGCAAAGTATGCAAGCTCATTTTATGGCCCATTTAGAGAAGCGCTGGACTCCAACCCTCGGTTTGGGGACAAGAAAACTTATCAGATGAATCCAGCAAATTACAGAGAGGCTCTGACTGAGATGCGAGAAGATGAATCTGAAGGAGCTGATATTCTCTTGGTGAAGCCTGGTCTTCCTTATTTGGATATCATAAGGCTTCTGAGGGATAATTCTCCTTTGCCAATTGCAGCATATCAGGTTTCTGGTGAGTACTCAATGATAAAAGCTGGTGGTGCTCTGAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCACTATTGTGCCTCCGACGGGCTGGTGCTGACATCATCTTGACCTATTTTGCTCTTCAAGCTGCCAGAAGTTTATGTGGAGAAAAGAGGTAA 1326 0.4811 MLMASAIANAQFTIINPSSSFDSHGYIGLRPTQPSNLKLSSNRTTSTNLLRPLHLFAVRASDSHNGNQAGPLHKLGLSDAECEAAVVAGNVPEAPPVPPKPASPVGTPVVPSLPLNRRPRRNRRTPALREAFQETTISPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPDALKSPTGNEAYNDNGLVPRSIRLLKDKFPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAMRAALDAEGFHHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARSLCGEKR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0641 441 SMART ALAD_2 114 436 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 234 248 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 265 284 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 303 322 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 355 371 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 380 395 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 PRINTS Delta-aminolevulinic acid dehydratase signature 410 429 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 Gene3D Aldolase class I 107 441 IPR013785 -
Amo08g0641 441 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 91 440 - -
Amo08g0641 441 Pfam Delta-aminolevulinic acid dehydratase 117 434 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 355 367 IPR030656 -
Amo08g0641 441 Coils Coil 438 441 - -
Amo08g0641 441 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 91 440 IPR001731 GO:0004655|GO:0033014|GO:0046872
Amo08g0641 441 MobiDBLite consensus disorder prediction 94 120 - -
Amo08g0641 441 CDD ALAD_PBGS_aspartate_rich 125 437 - -
Amo08g0641 441 MobiDBLite consensus disorder prediction 94 108 - -
Amo08g0641 441 SUPERFAMILY Aldolase 113 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0641 Amo-Chr8 11485597 11489152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0641 K01698 - pvy:116131601 665.611