Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0627 ATGATGGCTCAAACTATGTTGCTCATGTCTAGTGTCTCAACTACTTACTCCATGGATTTGAAGAAAGACACTTTGCTTCAACTTCAGAATCAAAGATTGAGGCCTAAATTCTCTCATCTCCCATTCAACCCAATTCCTTCTAATTCTCTCTCTTTTTCACCTCCTACATTCACAACTCTGGCACTCTTCAAATCCAAGACCAAAGCCCCTCCTAAGGTTGTAAAGCCAAAGCCAAAGGTTGAAGATGGTATATTTGGAACTTCTGGAGGCTTTGGTTTTACTAAGCAGAACGAGCTCTTTGTTGGTCGTGTTGCCATGCTTGGTTTTGCTGCATCAATTTTGGGAGAAGCAATTACTGGGAAAGGGATTTTAGCACAATTGAACTTGGAAACAGGGATTCCAATTTATGAAGCTGAGCCTCTTCTCCTTTTCTTCATCCTTTTCACACTGCTTGGAGCCATTGGAGCACTTGGTGACCGTGGTAGATTCGTTGATGATGATGAACCTAACACTGGAGGTGTCATTCCTCCAGGCAAAGGTTTCAGATCAGCTCTTGGTCTCAAAGAAGGAGGTCCTTTGTTTGGATTCACCAAAGCAAACGAACTATTTGTTGGAAGATTGGCTCAATTGGGATTTGCATTCTCTTTAATTGGAGAGATTATTACAGGGAAAGGAGCACTCGCACAACTCAACATTGAGACAGGGGTACCCATCAATGAAATTGAACCCCTTGTGTTGTTCAATGTTGCTTTCTTCTTCATTGCTGCTCTCAATCCTGGAACTGGTAAATTTGTCACAGATGAAGAGGAAGATTAG 816 0.4203 MMAQTMLLMSSVSTTYSMDLKKDTLLQLQNQRLRPKFSHLPFNPIPSNSLSFSPPTFTTLALFKSKTKAPPKVVKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDDDEPNTGGVIPPGKGFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGKFVTDEEED* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0627 271 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 194 257 - -
Amo08g0627 271 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 2 182 - -
Amo08g0627 271 Gene3D Chlorophyll a/b binding protein domain 57 133 - -
Amo08g0627 271 Gene3D Chlorophyll a/b binding protein domain 134 242 - -
Amo08g0627 271 Pfam Chlorophyll A-B binding protein 89 216 IPR022796 -
Amo08g0627 271 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 2 182 - -
Amo08g0627 271 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 194 257 - -
Amo08g0627 271 SUPERFAMILY Chlorophyll a-b binding protein 69 250 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0627 K03542 - gmx:100807355 417.927