Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0613 ATGCAGATTATTGAAGTACCAGTTGTGATTGTAGGTGCAGGACCTGCTGGAATAGCAACCGCAGGGTGCCTCAACAAACTCAGAATCTCTAACATTGTTCTTGAAAGAGATGATTGTCCTGCTTCTCTTTGGAGAAAAAGAGCCTATGATCGTTTGAAACTACACTTAGGAAAAGAATTTTGTAGCCTTCCACATTATCCTTTTCCTTCTGACTTTCCCAAATTTGTCCCTAGAATTGATTTCTTGCGCTACATTGACTCTTACATCGCGCATTTCAGTATTGCCATCAACTACAACTGCTCTGTTGACTCTGCTTTCATTGACCAAAGCAGTGGAAAGTGGAGGCTCCTTGTTACCAACAACTCTTCCGGTGCCAGTGAGATCTATGAAGCAGAGTTTCTGGTGGTTGCGAGCGGAGAAAATAGTGAAGAGTACATCCCAAACATTAAAGGGCTTGAGAGCTATCAAGGAGAGTCCATGCATTGTAGCAAGTATTTGAATGGAAGAGAAATGTACAAGAAGAATGTTTTGGTTGTTGGATGTGGCAATTCTGGTATGGAAATTGCTTATGATCTTTCAATTTGGGGTGCATATACCTCTATTGTCGTCAGAAGTCAGGTGCATTATTTTACTAAAGAAATGGTGTATGCGGGTATGTTGATGCTGAAACACTTTATGGTGGAAAAAGTGGACAAGATGATGATTCTTATGAGCAAATTGAAGTATGGGAATATGTTTAAGATTACAGGAATCTATTCAATGAGAACGGAATGCCAAAACCAAGTTACCCAAATCATTGGAAAGGAGAACATGGAATTTACAGTGCTGGATTTTCAAAAAGAGGATTAG 849 0.3981 MQIIEVPVVIVGAGPAGIATAGCLNKLRISNIVLERDDCPASLWRKRAYDRLKLHLGKEFCSLPHYPFPSDFPKFVPRIDFLRYIDSYIAHFSIAINYNCSVDSAFIDQSSGKWRLLVTNNSSGASEIYEAEFLVVASGENSEEYIPNIKGLESYQGESMHCSKYLNGREMYKKNVLVVGCGNSGMEIAYDLSIWGAYTSIVVRSQVHYFTKEMVYAGMLMLKHFMVEKVDKMMILMSKLKYGNMFKITGIYSMRTECQNQVTQIIGKENMEFTVLDFQKED* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0613 282 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 5 247 - -
Amo08g0613 282 Pfam Pyridine nucleotide-disulphide oxidoreductase 9 208 - -
Amo08g0613 282 SUPERFAMILY FAD/NAD(P)-binding domain 8 213 IPR036188 -
Amo08g0613 282 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 247 - -
Amo08g0613 282 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Amo08g0613 282 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Amo08g0613 282 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
Amo08g0613 282 PRINTS Pyridine nucleotide disulphide reductase class-II signature 7 29 - -
Amo08g0613 282 Gene3D - 3 244 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0613 Amo-Chr8 10936196 10938047 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0613 K11816 - gmx:100801203 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0613 08 10936196 10938047 Amo17g2635 17 125762173 125765816 hybridization