Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0606 ATGGAGTGCAGGAACTATATTGTTGGGCTCTACATGGAGGACCCTGGGAAGAGGATTACTGTCTCTGATTGTCAGGGATTGTTGGTTGCAGTTGACAAAGAAGATTTAGCTCGGATTGTCCGGTTCCTTGATCATTGGGGAATCATCAATTACTGTGCTTTGGAGTCATGTCATGCGCCATTTAATGATGCATCCTTCCTGAAGGAGGAGACAAGTGGAGAAGTCCGCGTGCCCTCAGAGTTTCTAAAATCCATAGATAGTCTGATAAGTTTTGACAAGCCCAAGTGTAAGGTCAAAGCAGAAGAAATTTATTCATCATTCACAATGCACAATGCTGATGTCACTGATCTGGACAACAGGATACGGGAACATCTATCCGAAAATCATTGCCATTGTTGTTCTCGTCCACTTCCTGCTGTACACTATCAGTCACAAAAAGAGGTTGATATTTTACTTTGTACTGGCTGCTTTCATGATGGGAGATTTGTCGTTGGACATTCAAGTATAGATTTTGTAGGAAACTTGTTGCTGCTTGAAGCAATGGAGATTTACAATGAGAATTGGAATGAAATTGCCGAACATGTTGGGACCAAGTCAAAAGCACAATGCATTCTTCATTTTCTTCGTCTACCAATGGAAGATGGAAAATTGGAAAATATCAACATTCCAAGCGTGTCTTTGCCATCCAATGTGATGAATAGAAATGATAGTGGAAGAATGCATGGCTACGTAAACGGAGATTCTGCAGGAACTGTCCGCCAAAGCAGAGATTCTGACAGCAGGTTTCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTTTGGTAGCCTTTTTAGCCTCTGCCGTTGGACCAAGAGTAGCTGCTGCTTGTGCTCATGCAGCATTAGCAGTATTATCAGAGGATACTTCTGGCAGCACATCGCAAATGGAAGTACAAGGACATGATAATAGGTCAAATTCAGAAAGTGCACATAGTAGAGATCGTGGAGAAACTGCAATTTCAAATAATCATAATGGAAAGGCAAAACTTGTTGGTTCACGAGGTCAAAATGAAGGCGGGACAACACCACTATCTGTTGAGAAAGTTCAAGATGCAGCAAAGGCAGGCCTCTCTGCTGCAGCCATGAAATCTAAATTGTTTGCTGATCATGAAGAACGAGAAATCCAGAGGCTATGTGCTAGTATCGTTAGTCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCTGAAATTGAAACATTATTGATGAAAGAATGTGAACAAGTTGAGAGGACAAGGCAGAGATTTGCTGCTGAGCGGTCCCGTATTATATCTGCTCGTGTTGGTCCTTCCATGTCTAACAGTAATGGCAACAGTAGGCCACAAATGATCTCTGCGTCTCCCTCGCAGCCCAGCATCTCGGGGTATGGCAACAACCAACCAGTTCATCCACACATGTCCTTTGCCCCGAGACCTTCTATGTTTGGTTTGGGACAAAGACTGCCCCTATCTATGATACAACAATCTCAATCACCTCAAATGCCATGTTCAATGCCCCTAGTAATGTGCAACCCACTTCCAATCATCCATTGTTGA 1581 0.4288 MECRNYIVGLYMEDPGKRITVSDCQGLLVAVDKEDLARIVRFLDHWGIINYCALESCHAPFNDASFLKEETSGEVRVPSEFLKSIDSLISFDKPKCKVKAEEIYSSFTMHNADVTDLDNRIREHLSENHCHCCSRPLPAVHYQSQKEVDILLCTGCFHDGRFVVGHSSIDFVGNLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINIPSVSLPSNVMNRNDSGRMHGYVNGDSAGTVRQSRDSDSRFPFANSGNPVMALVAFLASAVGPRVAAACAHAALAVLSEDTSGSTSQMEVQGHDNRSNSESAHSRDRGETAISNNHNGKAKLVGSRGQNEGGTTPLSVEKVQDAAKAGLSAAAMKSKLFADHEEREIQRLCASIVSHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSRIISARVGPSMSNSNGNSRPQMISASPSQPSISGYGNNQPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQSPQMPCSMPLVMCNPLPIIHC* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0606 526 SUPERFAMILY Homeodomain-like 1 57 IPR009057 -
Amo08g0606 526 Gene3D - 174 215 - -
Amo08g0606 526 MobiDBLite consensus disorder prediction 317 333 - -
Amo08g0606 526 Gene3D - 1 50 IPR036388 -
Amo08g0606 526 MobiDBLite consensus disorder prediction 301 356 - -
Amo08g0606 526 MobiDBLite consensus disorder prediction 241 261 - -
Amo08g0606 526 CDD SANT 176 210 IPR001005 -
Amo08g0606 526 ProSiteProfiles Zinc finger ZZ-type profile. 124 186 IPR000433 GO:0008270
Amo08g0606 526 Pfam SWIRM-associated region 1 368 441 IPR032451 -
Amo08g0606 526 ProSiteProfiles SWIRM domain profile. 1 60 IPR007526 GO:0005515
Amo08g0606 526 PANTHER SWI/SNF COMPLEX-RELATED 1 517 - -
Amo08g0606 526 ProSiteProfiles SANT domain profile. 175 215 IPR017884 -
Amo08g0606 526 Pfam Myb-like DNA-binding domain 176 210 IPR001005 -
Amo08g0606 526 MobiDBLite consensus disorder prediction 301 316 - -
Amo08g0606 526 SUPERFAMILY Homeodomain-like 175 219 IPR009057 -
Amo08g0606 526 Pfam SWIRM domain 1 51 IPR007526 GO:0005515
Amo08g0606 526 MobiDBLite consensus disorder prediction 334 356 - -
Amo08g0606 526 MobiDBLite consensus disorder prediction 443 476 - -
Amo08g0606 526 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 1 517 - -
Amo08g0606 526 SMART sant 165 213 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0606 Amo-Chr8 10863794 10868290 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0606 K11649 - gmx:100780440 767.303