Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0600 ATGTACCGTCCGCCACCGTCGTCTTCGTCGACCTCCATGTACGGCCCGCAACCTCTGTACCCGAAGATCGGTCCCCACCCTCACGCCGCCGCCGGCCGCCCCTCGCCCTATCAGCAGAGTCCTGCTCCTCCTCCGTCCTCTTCTTCTGGATTGGGCATCAAGGTTACTATCAAGCCAGAATATAGGATCACACCGCCGCCTCATTTATCACCACATGTTGGAGATATTCCGCGTAGCAACTTCCAGTTTGACTTTGGATTGGAGAGAAAAATTATGGCTGAAGCACAGAAGGAAAACCCAAATTGGAGCAAATTTGGGACAGAAAATCTGCCTAAGGTTTCTGAATCAATATCGTCATCATCGTCACCAAGGGTTTCTGTTGCAGATCCTGTTGTGAGCAAATATATTGCCATGGGTCTCAACCGAGAGGCCGTTCCCATAGCTGTTGCAAATTATGGGGATAATCCAACTAAGGTTCAGGGATTTGTCAATGCTTACACCCTTCTGCGTGAAATGGGATTTTCGTCCAACAGCGTTACTGAAGCTCTGATTATGCATGACAATGACACAGACAAGGCACTAGCACATTTCCTTAGTGGCTCATCATGA 609 0.4926 MYRPPPSSSSTSMYGPQPLYPKIGPHPHAAAGRPSPYQQSPAPPPSSSSGLGIKVTIKPEYRITPPPHLSPHVGDIPRSNFQFDFGLERKIMAEAQKENPNWSKFGTENLPKVSESISSSSSPRVSVADPVVSKYIAMGLNREAVPIAVANYGDNPTKVQGFVNAYTLLREMGFSSNSVTEALIMHDNDTDKALAHFLSGSS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0600 202 MobiDBLite consensus disorder prediction 1 52 - -
Amo08g0600 202 MobiDBLite consensus disorder prediction 1 16 - -
Amo08g0600 202 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 169 200 IPR015940 -
Amo08g0600 202 PANTHER - 5 202 - -
Amo08g0600 202 CDD UBA2_UBAP1_like 162 198 - -
Amo08g0600 202 PANTHER LD44032P 5 202 IPR038870 GO:0000813|GO:0043130|GO:0043162
Amo08g0600 202 SUPERFAMILY UBA-like 156 200 IPR009060 GO:0005515
Amo08g0600 202 Gene3D UBAP1 SOUBA domain 125 202 IPR042575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0600 Amo-Chr8 10815965 10820927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0600 - - aprc:113852741 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0600 08 10815965 10820927 Amo17g2561 17 124449522 124452112 hybridization