Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0539 ATGGACTCAAGTCTCTTGTTGTCTACATTGAATCAAGAAACAGTTATTGGGGTGGAGCCGCCCCACTTGCCCACAAATTTCGTTTGGCCAATGGAAGACCTTGTTGACGCCCACGGGGAACTCGAAGTTCCAGTGGTAAACCTTTCTGGGTTCCTCAATGGAGACGACGAGGCCACGTGGTGCGTCGCAAAGCTCGTCCATCGAGCATGCTTGAGCCATGGGTTCTTCCAAGTGATRAACCATGGGGTTGATCCTGCACTCATTGCTCAGGCCGCATATGCTCAGATGGACAAATTTTTTAGGGTTCCCACTCAGAGGAAGTTGAGTTTTTCAAAGAAACCAGGTTTYTTGTGGGGATATTCCGGTGCACATCCGGTTGTTGCAAATTATTTTAATACCACATTAGGAGAAGATTTTCAACAAACTGGAGTGACGTTCCAGAAGTACTGCAAAGCCATGAAGGAATTAGGGGTGAAGCTAACGGAGCTATTAGCAATAAGCTTAGGGTTGAAAGATAGATTGCATTACAAGGAGTTATTTGAAGAAGGTTGTTCCATAATGAGATGCAACTATTACCCACCATGCCACCAACCAAGCCTTACACTTGGGACAGGACCCCATTGTGATCCAACATCTATAACCATTCTTCACCAAGATCAAGTTGGAGGGCTTCAAGTCTTTGCTGATAAGAGGTGGAAAAATGTTCAACCTCGCTCAGATGCTTTTATTGTTAACATTGGTGATACATTCACGGCACTATCAAATGGAAGGTACAAGAGTTGCTTGCATAGGGCAGTGGTAAACAGMTACAAAGAGAGAAGGTCATTGGCATTCTTTCTATGCCCTAAAGAAGACAAGATTTTGAGACCACCCCAAGATATTWTTCGCATTGATGGGACCAAACATTTCCCTGATTTTACTTGGTCTGATTTGCTTCTCTTCACACAAAAACATTATAGAGCCGATGAAGCTACACTCCACAACTTCACCAACTGGTTCCTTTCTTCCAAAACCYATAAATAG 1023 0.436 MDSSLLLSTLNQETVIGVEPPHLPTNFVWPMEDLVDAHGELEVPVVNLSGFLNGDDEATWCVAKLVHRACLSHGFFQVXNHGVDPALIAQAAYAQMDKFFRVPTQRKLSFSKKPGFLWGYSGAHPVVANYFNTTLGEDFQQTGVTFQKYCKAMKELGVKLTELLAISLGLKDRLHYKELFEEGCSIMRCNYYPPCHQPSLTLGTGPHCDPTSITILHQDQVGGLQVFADKRWKNVQPRSDAFIVNIGDTFTALSNGRYKSCLHRAVVNXYKERRSLAFFLCPKEDKILRPPQDIXRIDGTKHFPDFTWSDLLLFTQKHYRADEATLHNFTNWFLSSKTXK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0539 340 SUPERFAMILY Clavaminate synthase-like 13 321 - -
Amo08g0539 340 PANTHER GIBBERELLIN 20-OXIDASE 18 124 - -
Amo08g0539 340 PANTHER GIBBERELLIN 20-OXIDASE 125 336 - -
Amo08g0539 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 124 - -
Amo08g0539 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 125 336 - -
Amo08g0539 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 124 IPR026992 -
Amo08g0539 340 Pfam 2OG-Fe(II) oxygenase superfamily 185 282 IPR044861 -
Amo08g0539 340 Gene3D - 10 313 IPR027443 -
Amo08g0539 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 180 282 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0539 Amo-Chr8 9827030 9831387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0539 15 281 Glycosyltransferase AT5G59530 29.293 2.23e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0539 K05282 - gmx:100776707 489.189