Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0396 ATGGCTACTACCTCACCTTTCTCCATCTCATGCATTTCACAAACTAAATTGCTCCACAAACAAAATCCACACCAACCATCCCATTACACAAGATCATCYTTGTCACCACAATTTAAACACAAATCATCATCACTACTTTACAACCCTCTAAGATACAATGGTGTTTCACCAATTGTTATGAAACCCAAAAGTGGTAATGCTGGAGTATCCGTTAAGGCATTGTATAACAAGACCGTGGAGGTGTTTAACAAAGAATACATCTCTGTGTCTTTAGCCAAATATGTAGCTGATRTATCTGAAAAATTCATCAAACAGAGAGGATTTTTCTCTATAGCTTTATCTGGCAACTCTGTCAAGCACCTCAAGGCCTTGGTGGAACCTCCATATGCTAACACAATCCAATGGTCTAAGTGGCATGTATTTTGGGCAGATGAAAAAGTGGTGCCTAAAACTCACATAGACAGTAACTACAAGCTTGCTTATGACACATTTATTTCTAAGGTGCCAATTGCTATGAATGTGAACACTATTGATGATGCTCTATCAGCTGAAGTTGCAGCTGATGTGTATGAGACAAACATCAAAATCAAAGTTGATAGTAATGTGATAYCTTTATCACCAAACACTAGACTTCCAAAATTTGATCTCATGTTACTGGACATGGGATCAGAAGGCCAAGTAGCCGGTCTGTTCCGGAAAAACCCTGTCCTAACAGAGACTAGAAAGTGGGTTACCGCTGTCAAGAATGCACCACTGCCGTCCGAGAGAATCACCCTTACGCTTTCAGTGATTAATTCTTCTGCAAACATAGCGATGATAGTTACTGGAGCCAGTAAAGCAGACGCAGTCTATGCTGCATTAAAAGAGGATCAAAGTGATGATAAGATGCCAGTTCAGTTGCTTTCACCAGAAGGAGAAATGAAATGGTTTTTGGATAAGGGTGCAGCTTCAAAGCTATATAAGTAG 966 0.3975 MATTSPFSISCISQTKLLHKQNPHQPSHYTRSSLSPQFKHKSSSLLYNPLRYNGVSPIVMKPKSGNAGVSVKALYNKTVEVFNKEYISVSLAKYVADXSEKFIKQRGFFSIALSGNSVKHLKALVEPPYANTIQWSKWHVFWADEKVVPKTHIDSNYKLAYDTFISKVPIAMNVNTIDDALSAEVAADVYETNIKIKVDSNVIXLSPNTRLPKFDLMLLDMGSEGQVAGLFRKNPVLTETRKWVTAVKNAPLPSERITLTLSVINSSANIAMIVTGASKADAVYAALKEDQSDDKMPVQLLSPEGEMKWFLDKGAASKLYK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0396 321 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 320 - -
Amo08g0396 321 SUPERFAMILY NagB/RpiA/CoA transferase-like 83 319 IPR037171 -
Amo08g0396 321 Gene3D - 72 320 - -
Amo08g0396 321 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 86 307 IPR006148 GO:0005975
Amo08g0396 321 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 320 IPR039104 -
Amo08g0396 321 TIGRFAM pgl: 6-phosphogluconolactonase 84 319 IPR005900 GO:0005975|GO:0006098|GO:0017057
Amo08g0396 321 CDD 6PGL 90 311 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0396 Amo-Chr8 7628889 7630604 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0396 K01057 - gmx:100803687 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0396 08 7628889 7630604 Amo17g2432 17 121150714 121152439 hybridization