Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g0232 ATGGATAAATTGTATTTGTATGGGTTGAGCCACCTCTTTATGACGGTTTTTCTTCATAACTTCTCCACTCATATGGTGATACCAGCCATCACGGATGTAACCATGGCGGCGCTCTGTCCCGGAGAGGATGAATGCTCCCTTGCCATCTACCTCACTGGTTTTCAACAAGCGATGGTAGGACTTGGAACGCTTGTGATGATGCCACTCCTGGGTAATCTCTCAGATAAATATGGGAGGAAAACCATTATCACACTCCCCATGATCCTCACAATTATTCCAATAGGTATATTATCTTATAGCAGGACGAAAGAATTCTTCTACATATACTATGTCTTTAAGATTCTCATTTCCATGGTTTGCGACGGAAGCGTTCCTTGCCTCGCCCTGGCTTATGTGGCAGATAACGTAACAGAAGGTCGACGCGCCACCGCGTTTGGGATTCTTTCGGGAATAGGCTCCGCCGCCTTCGTCTGCGGCACTCTTTCAACTCGCTTCCTCTCTGCTGCCCAAACTTTCCAGGTTTCCACTCTTGTGGCGGTGATTGCAGCAGTGTACATGTTAGTTTTCCTTCGGGATTCGATTATCGATGAGAATAATCTTTCTACCCCAATCCTTACGGCAGAAAAGCCCGCCGCCACTAAAATTGAAGCAAAACCGAAAAGCAATGTGCAACTGTTTCAAGCTTTGCGATCTCTACAAGACCTAGCTTCCTTCCTCACTGGCAGCTTGACTATTACTCAAGCAGCAATTGTTGCGTTCTTCAGCAACCTTGCAGATGCTGGTCTTCATGGTTCAATGCTGTATTACTTAAAGGCTCAGTTTCATTTTGACAAGAATCAGTTTGCTGACTTGATGGTCATTTCTGGGGTTACAGGGACTGTGTCACAGCTTGTTCTTATGCCCATTTTGGCCCCAATTCTGGGAGAGGCAAGACTTCTTTCAATTGGACTGTTTTTCGGCTGTATTCATATGTTCCTTTACAGCATAGCATGGTCCTCGTGGGTTCCTTATGCTTCAGCCATGTTCTCAATAGTATACGTTTTTGCACAGCCCTGTATACGGAGCATAGTCTCTAAACAAGCTGGTTCTCATGAGCAGGGAAGGGCTCAGGGTTGCATTTCGGGCATATGTTCAGTTGCACATATTGCTTCTCCCTTGGTTTTCTCTCCATTGACGGCTCTTTTCCTATCTGAAAAGGCACCTTTTAATTTTCCTGGCTTCAGCATAATGTGCATTGGATTTGCTTCGATGATATCTTTTGCTCAAAGTCTGATGGTGAAAGTGGTTCCTCCCATTTTGAGTTGA 1305 0.4513 MDKLYLYGLSHLFMTVFLHNFSTHMVIPAITDVTMAALCPGEDECSLAIYLTGFQQAMVGLGTLVMMPLLGNLSDKYGRKTIITLPMILTIIPIGILSYSRTKEFFYIYYVFKILISMVCDGSVPCLALAYVADNVTEGRRATAFGILSGIGSAAFVCGTLSTRFLSAAQTFQVSTLVAVIAAVYMLVFLRDSIIDENNLSTPILTAEKPAATKIEAKPKSNVQLFQALRSLQDLASFLTGSLTITQAAIVAFFSNLADAGLHGSMLYYLKAQFHFDKNQFADLMVISGVTGTVSQLVLMPILAPILGEARLLSIGLFFGCIHMFLYSIAWSSWVPYASAMFSIVYVFAQPCIRSIVSKQAGSHEQGRAQGCISGICSVAHIASPLVFSPLTALFLSEKAPFNFPGFSIMCIGFASMISFAQSLMVKVVPPILS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g0232 434 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 8 430 - -
Amo08g0232 434 SUPERFAMILY MFS general substrate transporter 12 418 IPR036259 -
Amo08g0232 434 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 430 - -
Amo08g0232 434 CDD MFS_SLC46_TetA_like 12 425 - -
Amo08g0232 434 Pfam Major Facilitator Superfamily 12 385 IPR011701 GO:0022857|GO:0055085
Amo08g0232 434 ProSiteProfiles Major facilitator superfamily (MFS) profile. 8 434 IPR020846 GO:0022857
Amo08g0232 434 Gene3D MFS general substrate transporter like domains 9 426 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g0232 Amo-Chr8 3840757 3848461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g0232 8 430 Organic Solute Cotransporters AT2G16990 44.820 8.31e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g0232 - - gmx:100789917 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0232 08 3840757 3848461 Amo17g2087 17 107467410 107474631 hybridization