Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1874 ATGGAGACGGATTCAGAAGCCAAAGAAGAAGAAGATTCAGCCGCTGAAGGAATAAGTGATGAGCAGTTTATTCAGCTATGTGTTTTTCATTTGATGGTACTGGTTCACAGGACTATGGAAAATTCTGAAACATGCCGATTATTTGTGGAAAAATCAGGAATTGATGCTCTATTGAAGTTGTTATTGCGACCTACCATTGCACAATCGTCAGATGGCATGTCTATTGCTTTACATAGCACCATGGTTTTTAAGGGGTTTGCTCAACATCATTCTTCTCCTCTTGCACGTGCCTTCTGTTCCTCCCTTAGAGAACACATGAAGAAAGCACTAGCTGGGTTTGGTGCAGCTTCTGAACCTTTGTTGCTGGATCCAAGGATAACACCCGATAATGGCATTTTTCCTCACTCTTCCTTGTTGAGTTTCTTCTCTTTCTTGCTGCATCAAAAGACAATCGTTGGGTGA 462 0.4177 METDSEAKEEEDSAAEGISDEQFIQLCVFHLMVLVHRTMENSETCRLFVEKSGIDALLKLLLRPTIAQSSDGMSIALHSTMVFKGFAQHHSSPLARAFCSSLREHMKKALAGFGAASEPLLLDPRITPDNGIFPHSSLLSFFSFLLHQKTIVG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1874 153 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 1 149 - -
Amo07g1874 153 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL1-LIKE PROTEIN 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1874 Amo-Chr7 56040419 56040880 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1874 - K10592 aip:107608336 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g3001 17 132779663 132795016 Amo07g1874 07 56040419 56040880 hybridization
Amo07g1874 07 56040419 56040880 Amo17g3001 17 132779663 132795016 PCT