Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g1704 ATGAGAGCTGAGAGTGAGTGTCACCGAGAATTGAAAGAAGGAAGGAAAGAAAGAAGCGCGTTACTGATCCCTGAAACAATGTCGACTCTGAGAATTCCTCAACCTGTTCCTCCGGTTGCCGATGACTGCGAGCAGCTCCGCAAGGCCTTCGCGGGATGGGGAACTAACGAGGATTTGATCATATCGATCTTGGGTCATCGAAATGCTGCTCAGAGGAAGCTGATTCGAGAAACTTATTTTGAGACTTATGGAGAAGATCTCCTCAAAGCCTTGGACAAGGAGCTCAGCAATGACTTCGAGAGGCTGGTACTTCTTTGGACACTTGATCCTGCTGAGCGAGATGCGTTTTTGGCGAATGAAGCAACCAAAAGATGGACTTCAAGCAATCAGGTTTTGATGGAAATAGCTTGTACCAGGTCCTCTGACCAATTGCTTTTCGCAAGGAAGGCTTATCATGCTCGTTATAAGAAGTCTCTCGAGGAGGATGTTGCTCATCACACAACTGGGGAGTTCCGTAAGCTCCTACTGCCTTTGGTTAGTTCGTATCGCTACGAGGGGGATGAAGTGAACCTGACTCTAGCAAAAACTGAGGCAAAATTACTGCATGAGAAAATTTCCAAGAAAGCTTACAGTGATGATGAACTTATCAGGATTTTGGCCACAAGGAGCAAACCACAGATAAATGCTACTTTGAATCACTATAAAGATGAATTTGGAAAAGATATCAACAAGGATCTGAAAGCTGACCCAAAGGATGAGTTCCTGGCTCTACTGAGATCTACTGTCAAGTGCTTGGTCCGTAGCGAGAGGTACTTCGAGAAGGCTGCTCGTTTGGCCATCAACAAACGTGGAACCGATGAGGGAGCACTTACAAGAGTGGTGGCTACCAGGGCCGAGATTGACTTGAAAATAATAGCAGATGAGTATCAGAGGAGGAGCAGCGTCCCTCTTGATAAGGCCGTCGCCAAGGACACCACCGGAGACTACGAGAAAATGCTTTTGGCGATCTTAGGACATGATGATGTTTGA 1029 0.4645 MRAESECHRELKEGRKERSALLIPETMSTLRIPQPVPPVADDCEQLRKAFAGWGTNEDLIISILGHRNAAQRKLIRETYFETYGEDLLKALDKELSNDFERLVLLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSDQLLFARKAYHARYKKSLEEDVAHHTTGEFRKLLLPLVSSYRYEGDEVNLTLAKTEAKLLHEKISKKAYSDDELIRILATRSKPQINATLNHYKDEFGKDINKDLKADPKDEFLALLRSTVKCLVRSERYFEKAARLAINKRGTDEGALTRVVATRAEIDLKIIADEYQRRSSVPLDKAVAKDTTGDYEKMLLAILGHDDV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g1704 342 SMART annex3 54 106 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 SMART annex3 209 257 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 SMART annex3 284 336 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 SMART annex3 126 178 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 PANTHER ANNEXIN 32 341 - -
Amo07g1704 342 ProSiteProfiles Annexin repeat profile. 37 108 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Pfam Annexin 114 178 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Pfam Annexin 274 336 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Pfam Annexin 197 256 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Pfam Annexin 42 105 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Plant annexin signature 145 159 IPR009118 -
Amo07g1704 342 PRINTS Plant annexin signature 187 207 IPR009118 -
Amo07g1704 342 PRINTS Plant annexin signature 252 270 IPR009118 -
Amo07g1704 342 PRINTS Annexin family signature 51 73 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Annexin family signature 91 107 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Annexin family signature 118 139 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Annexin family signature 200 226 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Annexin family signature 280 300 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 PRINTS Annexin family signature 324 337 IPR001464 GO:0005509|GO:0005544
Amo07g1704 342 ProSiteProfiles Annexin repeat profile. 267 338 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Gene3D Annexin 109 179 IPR037104 GO:0005509|GO:0005544
Amo07g1704 342 ProSiteProfiles Annexin repeat profile. 192 263 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 Gene3D Annexin 191 266 IPR037104 GO:0005509|GO:0005544
Amo07g1704 342 SUPERFAMILY Annexin 28 341 IPR037104 GO:0005509|GO:0005544
Amo07g1704 342 PANTHER ANNEXIN 32 341 - -
Amo07g1704 342 Gene3D Annexin 24 108 IPR037104 GO:0005509|GO:0005544
Amo07g1704 342 Gene3D Annexin 268 342 IPR037104 GO:0005509|GO:0005544
Amo07g1704 342 ProSiteProfiles Annexin repeat profile. 109 180 IPR018502 GO:0005509|GO:0005544
Amo07g1704 342 ProSitePatterns Annexin repeat signature. 284 336 IPR018252 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g1704 Amo-Chr7 48678217 48681555 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g1704 K17098 - gmx:100784252 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1654 17 70411981 70415588 Amo07g1704 07 48678217 48681555 hybridization