Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3119 ATGACTTCTCTCCGGCTCCAATTCCTTCCAGAAAATCCCGTTCCGTTATTCTCCAATTCCACTCTTCATTACGCTCCGCGAACTCTCTCGTTTTCGAAAGTGGAACACCGCCAACGCCGTTTCTTCCCAATAACAACTTCTCTGACGGATTCTAACTACTCCGGAGTCGGAGTCGGAGGCGGAGGTGGAGGCTTGTTTGGTGCTACTTCTCAAGTATTTGATGTTCCACTTTTATCTTGCAATGAGGCTATTGAAAGGTTGAAAACATTCAGAGAAACAATAAAAGGCAAGCAACAATACCTTGCCATGTATTCAAGCATTTTTGGTGGGGTAACCACAGACCCTGCTGTTATGGTTATTCCTATGGACGACCACATGGTACACAGGGGCCATGGTGTCTTCGATACTGCGGCAATAATGGACGGGTACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTGAGGTCAGCATCCATGTCTAAGATAGATCCTCCATTCGATCGCGAAAGCATAAGAAGAATCCTCATACAAACTGTAAGTGCTTCCAAATGTCGAAAAGGATCACTAAGATACTGGCTCTCATCAGGACCCGGTGATTTTCAGCTATCCCCTGCAGGGTGCCACCAATCTTCTCTATACGCAATTGTAATACAGGATCTGTCATTGGCATCAACTAGTTCCAGGGGAGTTAAAGTTGTTACTTCATCAATACCCATTAAACCGCCACAGTTTGCAACAACTAAGAGTGTAAATTACCTCCCAAATGTGCTCTCGAAGATGGAAGCCGAAGAAGCTGGTGCCTTTGCCGGCATTTGGCTTGATCACGAGGGATTTGTTGCTGAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCCGAGAAGTTGTTGAGCAAGGGTAAGCTTCGCGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTGCCGCTGAAATGATGCTTATTGGCAGTGGCGTTCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTGGAGATGGGAAAGAAGGCCGTATAACGAAGGCTCTCTTCAATCTTATTGTTGAAGACATGGAGTCAGCACCCCCTCCAGTTCGTATACCTGTACCATATTAA 1200 0.4567 MTSLRLQFLPENPVPLFSNSTLHYAPRTLSFSKVEHRQRRFFPITTSLTDSNYSGVGVGGGGGGLFGATSQVFDVPLLSCNEAIERLKTFRETIKGKQQYLAMYSSIFGGVTTDPAVMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSASMSKIDPPFDRESIRRILIQTVSASKCRKGSLRYWLSSGPGDFQLSPAGCHQSSLYAIVIQDLSLASTSSRGVKVVTSSIPIKPPQFATTKSVNYLPNVLSKMEAEEAGAFAGIWLDHEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSAAEMMLIGSGVLVCPVVQWDEQVIGDGKEGRITKALFNLIVEDMESAPPPVRIPVPY* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3119 399 Gene3D - 223 389 IPR043132 -
Amo06g3119 399 CDD PLPDE_IV 124 382 - -
Amo06g3119 399 Gene3D - 79 219 IPR043131 -
Amo06g3119 399 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 75 398 - -
Amo06g3119 399 PANTHER AMINO-ACID AMINOTRANSFERASE 75 398 - -
Amo06g3119 399 Pfam Amino-transferase class IV 132 360 IPR001544 GO:0003824
Amo06g3119 399 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 108 387 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3119 Amo-Chr6 98302919 98306078 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3119 K18482 - gmx:100794026 572.392