Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3100 ATGAGGATTGAGGAAGCAGTTTCAGCTTCGAGCAAGCACCTCGTCTTCGCTTACTATGTTACTGGCCATGGTTTTGGCCACGCCACCAGAGTTGCCGAGGTGGTTCGGCAGTTGATCCTAGCGGGACATGATGTGCATGTAGTAACGGGTGCTCCTGCATTTGTTTTCACCTCTGCAGTTGATTCTCCTCGATTGTTCATTCGTAAGGTGCTTTTGGACTGCGGAGCAGTTCAGGCAGATGCTTTGACGGTTGATCGTCTTGCCTCTTTGGAGAAGTATTCTGAGACAGCAGTGAAGCCTCGTGCGGAAATCTTGGCACAAGAAACAGAATGGCTGAATTCAATCAAAGCTGACTTAGTGGTATCTGATGTTGTCCCAGTAGCATGTCGTGCAGCAGCAGATGCTGGTATTCGGTCTGTCTGTGTAACCAATTTTAGTTGGGACTTCATCTATGCAGAATATGTCATGGCTGCTGGAATACATCATCGCTCAATAGTGTGGCAGATCGCTGAGGACTATTCCCACTGCGAGTTCCTTATCCGACTCCCGGGATATTGCCCAATGCCTGCTTTTCGTGATGTTATTGATGTTCCTCTTGTTGTGAGGAGGTTGCATAAATCTCCAAAAGAGGTGAGGGAGGATCTTGGTGTAGCTGATGATGTGAAGTTAGTTATTCTCAACTTTGGTGGACAGCCAGGAGGATGGCAGCTAAAGGAGGAATTCTTGCCATCTGGCTGGCTCGGCTTGGTTTGTGGAGCTTCTGAGAGCACCGACCTTCCTCCAAACTTCAGAAAACTAGATAAAGAAGCATATACTCCTGATATTATTGCAGCATGTGATTGTATGCTTGGAAAAATTGGATATGGAACTGCAAGTGAAGCCTTGGCATATAAGTGTCCTTTTGTGTTTGTACGTAGAGATTATTTCAACGAAGAGCCTTTCTTGAGAAATATGCTTGAGTTTTATCAATGTGGCGTTGAAATGATTAGGAGGGATTTACTCACTGGTCACTGGAGACCTTATCTTGAACGTGCAGTAAGTTTGAATCCCTGCTATGAAGGAGGCATTAATGGTGCTGAGATGGCTGCCCACATCCTACAGGAGACTGCATTTGGGAAAAATTATGCATCAGATAAGCTTAGTGGGGCAAGAAGATTACGTGATGCTATTGTTCTTGGGTATCAACTGCAAAGGGCCACTGGCCGAGACGTTGCAATCCCAGAATGGTATGTAAATGCTGAAAGCCAACTTGGCCGGCGACCATCGGATCGGCCAGCAGATTTTGAAAGTGCTTTGGTTGAATCTGTAATAGATGACTTTGAGATTCTGCACGGAAATGTTCAAGGTTTTCCAGATACTGTGGCTTTCTTACATAGCTTAACTGAATTACATGCGAACCCCAAAAGGCGGGAGAGTAGGGCTGCAGCTTCTCTGTTCAACTGGGAGGAAGAAATATATGTGACAAGAGCTCCTGGAAGGTTAGATGTCATGGGTGGTATTGCTGACTATTCTGGAAGCCTTGTTCTTCAGATGCCAATCAAAGAAGCCTGCCATGTTGCTCTACAAAGGCTCCATCCAAGTAGACATAAGCTGTGGAAACATGCTGCGGCGCGACAGAATGACAGAGGAGAGGCTACTGCTGTGTTACAAATTGTGTCATATGGCTCAGAGCTTGGCTATCGTAGTCCAACATTTGACATGGATTTGTCTGATTTCATGGAAGATGGCAAGCTAATGTCTTATGAGAGAGCAAGGAAATATTTTGCTCAAGATCCATCCCAAAAGTGGGCAGCATATGTTGCTGGGGCAATTTTGGTCTTGATGACTGAGATGGGTGTGCGTTTTAACGACAGTATCACCATGCTGATTTCATCAGCAGTCCCTGAAGGGAAAGGTGTATCATCTTCTGCATCTGTGGAGGTCGCCAGTATGTCTGCGATTGCAGCTGCTCATGGATTAAATATCGACCCAAGAGACCTCGCTATACTTTGCCAAAAGGTGGAAAATCACATTGTAGGAGCACCATGTGGTGTCATGGATCAGATGACTTCGGCATGTGGTGAAGCCAACAAACTTCTAGCTATGATTTGCCAGCCTGCAGAGATTGTTGGCCTTGTAGAGATTCCCAACCATATCCGTGTCTGGGGAATTGATTCTGGAATAAGACACAGTATTGGAGGTGCAGACTATGGTTCTGTCAGAATTGGCACCTTTATGGGTCTGAAGATGATTAAGTCTAAAGCTTCAGATGAATTGTCTGATATGCAAACTAATGGGGTGAACAATGATGAAGTGGAACAAGATGATTTAGAACTACTTAAACAAGAAGCTTCCTTAGACTACTTATGTAATTTGCCTCCTCACAGATTTGAGGCTCTTTATGCTAAGCAAATTCCAAACTCCATTATCGGTCAATCATTTTTGGACACCTACAAAAATCACAATGATCCTGTCACTACTATTGATGACAAGCGAACTTATGGAGTGAGATTTCCCACAATGCATCCCATCTATGAAAACTTCAGAGTTAAGACCTTCAAATCACTTCTAACTTCAACAGCTTCAACTGATCAACTTACTGCCTTAGGAGAACTGCTATATCAGTGTCACTATAGCTACAGTGCTTGCGGACTTGGCTCCGACGCAACAGATAGGCTTGTACACTTGGTGCAGGAGGTGCAGCATAGTGCAGCCTCTAAAGCAGAAGACACAACATTATGTGGAGCAAAGATCACTGGTGGAGGTTCTGGTGGAACTGTTTGTGTAATTGGTAGAAACTGTCTCAAGAGCGGTGAACAAATAATTGAGATCCAGCAGAGGTACAAGAAGCAAACTGGTTATTTGCCTTTTATTTTCGAGGGTTCATCGCCTGGTTCAGGAAAGTTCGGGTACCTGAAAATACGCCACCGAACTGGTTCCAGATCCGATGTCAGGATGGGTTACACCAGTGACGAAGGGAGTCCGATATGA 2970 0.4488 MRIEEAVSASSKHLVFAYYVTGHGFGHATRVAEVVRQLILAGHDVHVVTGAPAFVFTSAVDSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRAEILAQETEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGIHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSPKEVREDLGVADDVKLVILNFGGQPGGWQLKEEFLPSGWLGLVCGASESTDLPPNFRKLDKEAYTPDIIAACDCMLGKIGYGTASEALAYKCPFVFVRRDYFNEEPFLRNMLEFYQCGVEMIRRDLLTGHWRPYLERAVSLNPCYEGGINGAEMAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRATGRDVAIPEWYVNAESQLGRRPSDRPADFESALVESVIDDFEILHGNVQGFPDTVAFLHSLTELHANPKRRESRAAASLFNWEEEIYVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRLHPSRHKLWKHAAARQNDRGEATAVLQIVSYGSELGYRSPTFDMDLSDFMEDGKLMSYERARKYFAQDPSQKWAAYVAGAILVLMTEMGVRFNDSITMLISSAVPEGKGVSSSASVEVASMSAIAAAHGLNIDPRDLAILCQKVENHIVGAPCGVMDQMTSACGEANKLLAMICQPAEIVGLVEIPNHIRVWGIDSGIRHSIGGADYGSVRIGTFMGLKMIKSKASDELSDMQTNGVNNDEVEQDDLELLKQEASLDYLCNLPPHRFEALYAKQIPNSIIGQSFLDTYKNHNDPVTTIDDKRTYGVRFPTMHPIYENFRVKTFKSLLTSTASTDQLTALGELLYQCHYSYSACGLGSDATDRLVHLVQEVQHSAASKAEDTTLCGAKITGGGSGGTVCVIGRNCLKSGEQIIEIQQRYKKQTGYLPFIFEGSSPGSGKFGYLKIRHRTGSRSDVRMGYTSDEGSPI* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3100 989 PIRSF Gal_kin_glcsltr 1 973 IPR012369 -
Amo06g3100 989 SUPERFAMILY Ribosomal protein S5 domain 2-like 478 701 IPR020568 -
Amo06g3100 989 Gene3D - 817 947 IPR036554 -
Amo06g3100 989 SUPERFAMILY GHMP Kinase, C-terminal domain 713 961 IPR036554 -
Amo06g3100 989 Pfam GHMP kinases N terminal domain 622 687 IPR006204 GO:0005524
Amo06g3100 989 PANTHER MEVALONATE KINASE/GALACTOKINASE 14 968 - -
Amo06g3100 989 Pfam GHMP kinases C terminal 859 926 IPR013750 -
Amo06g3100 989 Gene3D Glycogen Phosphorylase B; 205 347 - -
Amo06g3100 989 Gene3D - 471 714 IPR014721 -
Amo06g3100 989 PRINTS Mevalonate kinase family signature 490 514 - -
Amo06g3100 989 PRINTS Mevalonate kinase family signature 668 687 - -
Amo06g3100 989 PRINTS Mevalonate kinase family signature 908 925 - -
Amo06g3100 989 PRINTS Mevalonate kinase family signature 625 647 - -
Amo06g3100 989 Gene3D Glycogen Phosphorylase B; 18 174 - -
Amo06g3100 989 PANTHER L-ARABINOKINASE 14 968 - -
Amo06g3100 989 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 20 366 - -
Amo06g3100 989 Pfam Galactokinase galactose-binding signature 479 522 IPR019539 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3100 Amo-Chr6 97941452 97951470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3100 K12446 - gmx:100787860 1617.82