Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3077 ATGGAAAAATATCTGTCCGCCATTGGTATTGACGTCAGCTGCGCGCTCAATTCTCTCCGCCATGGAACCATCCCTCACAAAGACTGCCTCCTCCCTCTCATCTCCAAGCTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACCGTTAAGCTCCCTCAGATTATGAAGATTCTGAAGCACCAGAGTGTGAGAGGCCTTAGCATGATATCCTTCGAGCTTGAGGTTGTTGGTTATACCATAGCACTGGCTTACTGTCTCCACAAGGGGCTTCCCTTCTCTGCTTATGGGGAACTGTTGTTTCTTTTGATCCAAGCTTTAATTTTGGTTGCCATAATCTACTACTATTCTCGACCTTTGCGTACCACAACATGGATCCGAGCATTAATATATTGTGCTGTAGCACCCACTATCTTAGCTGGTCAAATTGATCCTTTTCTCTTTGAGGCTTTGTATGCATCCCAGCATGCGATCTTTCTCTCTGCCAGAATCCCTCAAATATTGAAAAACTTTTCTAACAGGAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTGATGAATTCTGCAGGTTCAATGGTTAGAGTATTCACAAGCCTCCAAGAAAATGCACCAAAAAGTGTTGTAATGGGTTCCGCAATTGGTGTTGCTACAAATTTCACCATCCTAAGCCAGATATTGTTCTACCAAAAGCCAAGGGTCACTGAGAAAGAGAAGAAAACGAAATAG 723 0.4481 MEKYLSAIGIDVSCALNSLRHGTIPHKDCLLPLISKLLGYAIVAASTTVKLPQIMKILKHQSVRGLSMISFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALILVAIIYYYSRPLRTTTWIRALIYCAVAPTILAGQIDPFLFEALYASQHAIFLSARIPQILKNFSNRSTGELSFLTSLMNSAGSMVRVFTSLQENAPKSVVMGSAIGVATNFTILSQILFYQKPRVTEKEKKTK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3077 240 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 4 229 - -
Amo06g3077 240 SMART ctns 160 191 IPR006603 -
Amo06g3077 240 SMART ctns 48 79 IPR006603 -
Amo06g3077 240 Gene3D - 154 239 - -
Amo06g3077 240 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 4 229 IPR016817 -
Amo06g3077 240 Pfam PQ loop repeat 155 205 IPR006603 -
Amo06g3077 240 Pfam PQ loop repeat 34 93 IPR006603 -
Amo06g3077 240 PIRSF Mpdu1 5 240 IPR016817 -
Amo06g3077 240 Gene3D - 32 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3077 Amo-Chr6 97675310 97678380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3077 5 227 Miscellaneous Gene Families AT4G07390 75.336 6.04e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3077 K09660 - gmx:100787632 385.185