Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3056 AGGTTTTTGAGTCAGAAGCTGAGAAAGAATGAGTTTGACAAATTGTGCTTTCGGTTACTCGGAAGGGAGAACATTCCATTGCATAATCATTTTATAAGATCAATTTTGAAGAATGCTTGCCAAGCGAATTCCGCACCACCAGTACAGCCATCCRGTACTCCGAAATCAGTGGCACATGCTTCTAACATATCTCCTAGTAGACAAGATGGACATGAACAGAGTGTTACCAACTTCCAAAGTCAAAATCAAAACGCACCCATTTGGTCAAATGGGGTTCTGCCAGTCTCCCCACGCAAGGTTCGGTCTGGAATGCGTGATAGGAAGCTTAAAGATAGACCAAGCCCTCTTGGACCAAATGGGAAAGTTGACTCTGTTGTTCATCAATCCACAGCTACTGAAGACAGTGGTAGTAAGGTTGAAATGGAGAATGGAACACTTAGTCATTGTGATTATCAAAGRCCCATACATCATCTTAAAGCAGTTGCCGAGCTACCTGAGAATGAAATAGGGGATGTTATTCAGAGACCTGCCGAAAAGTCAAGAATACATGACAAGGGGCCAACCAAAACATCGATTGTTGAAGATGGGGAAGAGGTGGAGCAGTTAAACCACGTCAGTTTTTCYAGAAGTCCCCTGACAGCACCGCTTGGAATTCCTTACTGCTCTGCTAGCGTGGGTGGGACCCGCAAAGCAGTGCCGGTTAGTAGCAGTAGTGATTTTGTTAGTTGTTGTGACAGTGGTAGCTTGTATGATACAGATACATTGAGAAGGCACATGCAACAGATTRCCATGGTACAGGGTCTTGGAGGTGTTTCTTTAGAATGTGCAAACACTTTGAAYAATATGGTAGATGTGTACTTGAAACGCTTAATCAGGTCTTGTGTTGATTTAGTGGGCGCTCGGACTACAAATCATTCAAGGAAGCCCCTTGTCTCTAAACAGCAGATTCAGGGGAAGGTCATGAACGGCATATGGCCAAATAATCTTTCRCATGTGCAGAGTGTTGGTGGCCTGGKAGAACMTGAGCCCGAACACAGACCACCCTGCTCTGTATCTTTGCATGATTTTAAGATTGCCATGCAGCTAAATCCACGTCAGCTTGGAGAAGATTGGCCTCTGTTGTTAGAGAAAATTTCTATGCAGTCCTTTGACGAATAA 1158 0.4387 RFLSQKLRKNEFDKLCFRLLGRENIPLHNHFIRSILKNACQANSAPPVQPSXTPKSVAHASNISPSRQDGHEQSVTNFQSQNQNAPIWSNGVLPVSPRKVRSGMRDRKLKDRPSPLGPNGKVDSVVHQSTATEDSGSKVEMENGTLSHCDYQRPIHHLKAVAELPENEIGDVIQRPAEKSRIHDKGPTKTSIVEDGEEVEQLNHVSFSRSPLTAPLGIPYCSASVGGTRKAVPVSSSSDFVSCCDSGSLYDTDTLRRHMQQIXMVQGLGGVSLECANTLNNMVDVYLKRLIRSCVDLVGARTTNHSRKPLVSKQQIQGKVMNGIWPNNLSHVQSVGGLXEXEPEHRPPCSVSLHDFKIAMQLNPRQLGEDWPLLLEKISMQSFDE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3056 385 MobiDBLite consensus disorder prediction 42 138 - -
Amo06g3056 385 MobiDBLite consensus disorder prediction 42 90 - -
Amo06g3056 385 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 1 298 IPR024738 GO:0070461
Amo06g3056 385 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 385 IPR024738 GO:0070461
Amo06g3056 385 MobiDBLite consensus disorder prediction 100 114 - -
Amo06g3056 385 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 385 - -
Amo06g3056 385 MobiDBLite consensus disorder prediction 123 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3056 Amo-Chr6 97207692 97208849 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3056 - - adu:107495367 652.514