Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3040 ATGAGTTTCAAAAGTTCATTGTTTCCACACTTGGCACTTTTCATCCTATACTTTTCTGCCACTCATGCATTTGACATTGCACAAATGCTATCACAATATCCAGAGTTTTCATCATTCAAGAAATTCCTAACGGATACAAAGATCGTGGACCAAATCAACAGCCGGAAAAGCGTGACGGTGATGGTGATGGACAACGCTGCTATGAGCGCCGTAGCCGGAAAATCACCAGATATCATCAAGGCGATCCTGATGACTCACGTGATTCTTGATTATTACGACGAAAGGAAGCTTATGTTAGCGCAAGGCAGCAATGTTTTACTCACCACGCTTTATCAAACCACAGGGCTTGCCGTAAACAATCAAGGATTCATCAAGGTAGCCCTTGTCGGCGAAGGCGAAATCGCCTTCGGCTGCGCGGCGCCTGGTTCCCCCTTAGATGTCAAGCTTGTTCAAACTGTAACCACCCAACCCTACGACGTCTCAATTCTTCAAGTTACAAAACCTATTATATGGCGTGGCCAAGATGCTGCGAAACCCGGTGGATCATTATCATCTCAGGGACCAAATGCTACGCCGGCAACAGGAACAGCTTCAGGCGCAACCAAACCAGTAGCTTCATCACAAGGTGCTGCAACTTCACCGATTCCGGCACAGGGAGGAGGAGCTTCGTCAAGTGCAGTAAAACCAGCATCTTCACAAGGAGCATCTTCACCGATTCCATCACAAGGCGCAAATGCACCCAAAGGAGCTGCAGCTTCAGGGACTACAAAGCCGATTCCTCCACAAGCTGCAACCCCGGCCGCCGCGGCGGGAACAAAACCGGTGCCTTCAAGTACAGGACATGGAGCAAATGCGTCTAGTTCGGCCAACGGAACCGCTGTGAATCCAGTGCCTTCGACTGCAAATTCCTCCACATCTGCTGCTCCTACAAAAAGCGGTGGAAATGCACCAAGCCCTGCTCAAGGCCGCGGCGGAAATGCACCAAGTCCGGCACAAGGACGATCATCGTCAACCTCACCACCATCGTCTTCACCAGGTGCAAGTTCACCAAGTGGAGCAGGCGGTGGTGGTGGTTCGAGTGGTTTGTCACCGTCACCGGGTTCAGCAAGTTCAATCGCACCAACACCGGTGGCTGTTTCACCTTCTGGAGACACCATTAACCCAGCTGCACCGAACGCAGGGCCAACGTCAAATGCAGGAGCACCTGATTCATCGGGTATTTCTCCGGGTCCAGCCATTGATGGTCCTACAGCAATAAGCCCTTCAGATGCAGCTGCAGACGCACCTCCTTCTTTTGGTAGTTCTTCACGCACCAAGATTAGTTTGTTTGGTGCGGTTATTACGGGTTTTGCTTCTCTTTTCGTAGTTTTGTAA 1374 0.5058 MSFKSSLFPHLALFILYFSATHAFDIAQMLSQYPEFSSFKKFLTDTKIVDQINSRKSVTVMVMDNAAMSAVAGKSPDIIKAILMTHVILDYYDERKLMLAQGSNVLLTTLYQTTGLAVNNQGFIKVALVGEGEIAFGCAAPGSPLDVKLVQTVTTQPYDVSILQVTKPIIWRGQDAAKPGGSLSSQGPNATPATGTASGATKPVASSQGAATSPIPAQGGGASSSAVKPASSQGASSPIPSQGANAPKGAAASGTTKPIPPQAATPAAAAGTKPVPSSTGHGANASSSANGTAVNPVPSTANSSTSAAPTKSGGNAPSPAQGRGGNAPSPAQGRSSSTSPPSSSPGASSPSGAGGGGGSSGLSPSPGSASSIAPTPVAVSPSGDTINPAAPNAGPTSNAGAPDSSGISPGPAIDGPTAISPSDAAADAPPSFGSSSRTKISLFGAVITGFASLFVVL* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3040 457 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 455 IPR033254 -
Amo06g3040 457 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 4 455 - -
Amo06g3040 457 MobiDBLite consensus disorder prediction 277 319 - -
Amo06g3040 457 MobiDBLite consensus disorder prediction 328 404 - -
Amo06g3040 457 SUPERFAMILY FAS1 domain 30 117 IPR036378 -
Amo06g3040 457 Gene3D FAS1 domain 23 157 IPR036378 -
Amo06g3040 457 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Amo06g3040 457 MobiDBLite consensus disorder prediction 176 435 - -
Amo06g3040 457 MobiDBLite consensus disorder prediction 179 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3040 Amo-Chr6 96879036 96880554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3040 - - adu:107495242 736.873