Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3033 ATGGCCACCGCAGTGTACCTCAATTCAGCGCATTCGAATCCTTTTCAAGCTACAAAAGGCAAATACGCCGCTCAATCTGTGAGAGCAGTTCCCATACGTGTATTATCAGTGGGGAAGAAGCGATCACGGGAGCTCCAACTCATGATTGATGAGTATGCTGAAAAGATAAAGTATTATTGCAGTTTTGAAGATGTTCAAATTCGGCCAAACCCTAGAAATGCACGTGATCAACGTGCTCAGGTTGATGACGAAGATGCAGCAATGATGAACCATATAAGGTCTGATGATTGGGTTGTGATGTTGGATGAACGTGGACAAGACATAAGATCCGAGGAAATGGCAGAGTTGATTGGTAATGCTGGAAATATGGGTGCTTCAAGATTATCTTTTTGCATCGGTGGGCCCTATGGTCATGGGAGAAAAATGAGGGAACGTGCTAACAAATCTATCAAGCTGTCTTCATTGGTCTTAAATCATCAAATCGCACTGCTTGTGCTCATGGAACAGCTCTACAGGTCATGGACAATTTTGAAAGGACAGAACTACCATCACTAG 555 0.4342 MATAVYLNSAHSNPFQATKGKYAAQSVRAVPIRVLSVGKKRSRELQLMIDEYAEKIKYYCSFEDVQIRPNPRNARDQRAQVDDEDAAMMNHIRSDDWVVMLDERGQDIRSEEMAELIGNAGNMGASRLSFCIGGPYGHGRKMRERANKSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQNYHH* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3033 184 SUPERFAMILY alpha/beta knot 32 182 IPR029028 -
Amo06g3033 184 CDD RlmH-like 32 184 IPR003742 GO:0006364|GO:0008168
Amo06g3033 184 Gene3D - 29 184 IPR029026 -
Amo06g3033 184 PANTHER METHYLTRANSFERASE 8 184 IPR003742 GO:0006364|GO:0008168
Amo06g3033 184 PIRSF MT_bac 30 184 IPR003742 GO:0006364|GO:0008168
Amo06g3033 184 Pfam Predicted SPOUT methyltransferase 32 183 IPR003742 GO:0006364|GO:0008168
Amo06g3033 184 SFLD SPOUT Methyltransferase 11 184 - -
Amo06g3033 184 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 30 184 IPR003742 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3033 K00783 - gmx:100817089 299.671