Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3027 ATGGACGCTGTAATGGACCGTTCTGAATCTCGTCATCATTTTCCTGTTATGCTCGCTGAAGTTTTGGACGTTTTCTCCAATCTCTCGCTTACTTCCTTCGTCGATTGCACCCTTGGCGCCGCCGGTCATTCCTCCGCTGTGATTAATGGGCATGCGGAGTTGAAGTATTTTGTTGGGATGGATGTGGATCCTGTGGCACATAACATGGCTCAAGCTCGAATCAATTCTGTAGTAGAAAAGCAATTGGATGGTGGTGTAAAAGTTTTTACGCTGCTAAGGAATTTCAGACATATCAAGTCTGCTCTTAGGGAAACTGGCGACGAACGGTTGGTGGATGGTAGCATCGATGGAATCTTGATGGACTTGGGCATGTCATCCATGCAGGTGGACAATCCCCAGAGAGGATTCAGTGTGCTAGCTGATGGTCCCCTTGATATGCGTATGGATCCACAGGCAAGTCTTAAAGCAGAGGATATATTAAATTCTTGGCCAGAATCTGAAGTTGGGCGTGTCCTAAGGGATTTTGGGGAAGAAAGTAATTGGCGTAATCTGCAAAAGAAGATTGTTCAAGCCCGGTTAGATGGTGGATTGCATTCCACTACTGACTTGCTCAATCTTATTCGACGTGTGACTCCTGCAATGAAAGGTGGAAGGCAAGGTTGGATAAAGACAGCAACCCGGGTGTTTCAAGCTCTTCGAATAGCTGTGAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTCTCGCCGGGGGGTAGGCTTGCCGTGATATCTTTCCATAGTCTAGAGGACAGAATTGTGAAGCAGACATTCCTTGATATAATTAAAGGAAGCGAAGATGAGAGCTGCGATAATAGTGATTTGAGGAAGGTGAGTGATGAGATAAAAGAGAAAGAAGCATGGATAAAACATGTGATAAATGGATCAAATGGAATCATTCTCACAAAAAGACCAATCACGCCCTCGGCCGAAGAAGAAAAATTGAACCGCCGAAGTAGAAGTGCAAAGCTCAGGGTGATTCAGAAGGTTTGA 1050 0.4495 MDAVMDRSESRHHFPVMLAEVLDVFSNLSLTSFVDCTLGAAGHSSAVINGHAELKYFVGMDVDPVAHNMAQARINSVVEKQLDGGVKVFTLLRNFRHIKSALRETGDERLVDGSIDGILMDLGMSSMQVDNPQRGFSVLADGPLDMRMDPQASLKAEDILNSWPESEVGRVLRDFGEESNWRNLQKKIVQARLDGGLHSTTDLLNLIRRVTPAMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLSPGGRLAVISFHSLEDRIVKQTFLDIIKGSEDESCDNSDLRKVSDEIKEKEAWIKHVINGSNGIILTKRPITPSAEEEKLNRRSRSAKLRVIQKV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3027 349 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 13 349 IPR002903 GO:0008168
Amo06g3027 349 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 7 349 IPR002903 GO:0008168
Amo06g3027 349 Pfam MraW methylase family 12 348 IPR002903 GO:0008168
Amo06g3027 349 PIRSF MraW 7 349 IPR002903 GO:0008168
Amo06g3027 349 SUPERFAMILY Putative methyltransferase TM0872, insert domain 134 237 IPR023397 GO:0008168
Amo06g3027 349 Gene3D Vaccinia Virus protein VP39 13 346 IPR029063 -
Amo06g3027 349 Gene3D Putative methyltransferase TM0872, insert domain 132 239 IPR023397 GO:0008168
Amo06g3027 349 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 348 IPR002903 GO:0008168
Amo06g3027 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 348 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3027 K03438 - gmx:100787277 523.857