Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3018 ATGCTGAGGAAGAGGGCAAGATCAATTCATAAGGATCAAAATCACAAGGATCAGAGGACAATGATCTCTGATGCTGATTATGATTGCAATTCATTGGAGGTGACGAACATAAAAAACAGCTCAATTTTCAATGCTCCTCTTGTGTTTGTTGGAATGGGTCAGAGAGGGGTTTTAGATTCTGATTCAGTTAAGAGCCCCACTTCTCCACTAGATTTCACATGGATTTCAAATCTAGGAAACCCTTTTGTTAGGACCCCAAGATCTTCACTCCATGAAGGGAAACAACAAAGGATTTGGGATTGTAACAACAAAGTAGGTTTAGGGATCATAGATTCTTTGGAGTTGGAAGATAATAACTGTTCTGAGTTTTCTGGGAAAATTCTCTTTTCATCAGAGAACAAAAAGCCTAGCCTCACTCCACAGATGATTATCAATGCCCCAAATTGCAGAACATTTGTGGATTCTGTTAAGGTATCTAAGTCCTTGCCAAAAGATTTTTGCAAGCTTCCTTATACTAAGAATAGTGAGGATTCCTCTCACATGGGTAAATTTAATGTTCTTTATGAGATTGGTGAAACCATCCAAGAGCATGCACCTTTTGGGAAAACTAGGTCCTTCTCATTGGACTCTTTCACCCTGATTGATTCCAATGTGGATTCAGATTCTAAGGATTTCGGTTCAAACCGAGAGATCCGTCCTCCTCATTTTATTGGAGGGAGCAAGAATTCAAACACATATCTGCCTGAAGCCGCCTCCATCTGCTCCTCTAATGAGATTGTGAAGTTTCTATCAACTAGTGAGATTGAAAATTCTGAGGACTACACCTGTGTGATCTCGCACGGTCCCAGTCCGAAAACCACTCACATTTTTTGTGACTGCATCTTGAGAACTCATTCCAATGATTTTAAAAACCACTATAATGAAGGGGAGGATAAAGGAGTGTCCTCCATAGTGGAGGACAACATGTTACAGACTCCAATCCAGTGCCCTTCTGGTGATTTCTTAAGTATCTGCTACCATTGCAACAAGAAACTCAAAGAGGGTGAAGATATTTACATATATAGAGGTGAAGAGTCGTTTTGCAGTTTAGCTTGCCGTGAGATGGAAATCATGATCGATGAGGCGAGACAGGAATCATCGAATTCAGCTTCTCAAAGCCCTCCGAAGATGGGATATCATGGGGATATTTTTGAGCTAGGCATCCCCACGGCCATTGCGGTATAG 1224 0.4109 MLRKRARSIHKDQNHKDQRTMISDADYDCNSLEVTNIKNSSIFNAPLVFVGMGQRGVLDSDSVKSPTSPLDFTWISNLGNPFVRTPRSSLHEGKQQRIWDCNNKVGLGIIDSLELEDNNCSEFSGKILFSSENKKPSLTPQMIINAPNCRTFVDSVKVSKSLPKDFCKLPYTKNSEDSSHMGKFNVLYEIGETIQEHAPFGKTRSFSLDSFTLIDSNVDSDSKDFGSNREIRPPHFIGGSKNSNTYLPEAASICSSNEIVKFLSTSEIENSEDYTCVISHGPSPKTTHIFCDCILRTHSNDFKNHYNEGEDKGVSSIVEDNMLQTPIQCPSGDFLSICYHCNKKLKEGEDIYIYRGEESFCSLACREMEIMIDEARQESSNSASQSPPKMGYHGDIFELGIPTAIAV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3018 407 Pfam zinc-finger of the FCS-type, C2-C2 328 375 IPR007650 -
Amo06g3018 407 PANTHER FCS-LIKE ZINC FINGER 11 1 392 IPR044585 -
Amo06g3018 407 ProSiteProfiles Zinc finger FLZ-type profile. 333 377 IPR007650 -
Amo06g3018 407 PANTHER DUF581 FAMILY PROTEIN 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3018 Amo-Chr6 96662585 96665048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3018 - - adu:107495370 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g3018 06 96662585 96665048 Amo08g2027 08 32688890 32690568 PCT
Amo08g2027 08 32688890 32690568 Amo06g3018 06 96662585 96665048 PCT