Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3005 ATGATGAGCAAGAAAGTGAGAGAAGCATGTGAAAAGCATGGTTACTTTGTGTTAGTGTGTGATGATGATGATGATGAAATAGTTCCAAAGGTTTTAAGAGAAAAGATGGTGATGGGGTTAAAGGAATTGTTTGATTTACCTGAAGAAACAAAAATGAAGCACCAAAGCACAACAAAGCCATATAGTAGCTACACTAGTGATTGCCCTGTTATTCCTCTCAATCAAACCTTTGGTGTTTGTGATAGCCATGTCTTCCATGTTTCTCAACAATTCACCAATCTCATGTGGCCTCATGGCAACCCATCTTTCTGGTATGACTTTAATTTAATTTTCTTTTTTGCATACAATGAATTCCATAAGTTCAAAGTTGCTGGAATGAATTACATGATCTTGAAGATGATTGAAGAGGGTTATGAGCTTCCAAAGCACTACATTGACATTGAAGACATGCTAATGAAGGGTACCGTTTATTTGCGTCTAATGAAGTACAAAACTCCAAGCAAAGAAAACAAGAAAGAAGGTGAAATTGGATTGGTGACTCACACTGACAAAAACACATTAACTATTCTTTGCCAAAATGATGTGCAAGGTCTTGAGGTGCAAACCAAAACTGGAAAATGGATTCAATTGGAGATACCCCAAAATGCCTATGTGGTCGTTGTTGGTGACATATTGAAGGCATGGAGCAATGGTAGATTACATGCGGTTAGACATAGAGTGACAATGAAGGAGAAAAGAAAATACTCATTTGGAGTGTTTACAATGCCTAAGGATGAAGCCAAGATTGAGGTGCCACCTGAGTTGGTTGATGCCAACACTCATCCTTTACGTTATCATCCATTCACTTATGGAGACTACATCAAATTCTTTGTTTCCAATCTCAATGAGAATGCACTTGATGAATTTGCTGCTCTTTAA 918 0.3758 MMSKKVREACEKHGYFVLVCDDDDDEIVPKVLREKMVMGLKELFDLPEETKMKHQSTTKPYSSYTSDCPVIPLNQTFGVCDSHVFHVSQQFTNLMWPHGNPSFWYDFNLIFFFAYNEFHKFKVAGMNYMILKMIEEGYELPKHYIDIEDMLMKGTVYLRLMKYKTPSKENKKEGEIGLVTHTDKNTLTILCQNDVQGLEVQTKTGKWIQLEIPQNAYVVVVGDILKAWSNGRLHAVRHRVTMKEKRKYSFGVFTMPKDEAKIEVPPELVDANTHPLRYHPFTYGDYIKFFVSNLNENALDEFAAL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3005 305 Gene3D - 1 304 IPR027443 -
Amo06g3005 305 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 256 IPR005123 -
Amo06g3005 305 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 2 304 - -
Amo06g3005 305 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 304 - -
Amo06g3005 305 SUPERFAMILY Clavaminate synthase-like 4 294 - -
Amo06g3005 305 Pfam 2OG-Fe(II) oxygenase superfamily 162 254 IPR044861 -
Amo06g3005 305 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 65 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3005 Amo-Chr6 96415580 96421845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g3005 176 240 Glycosyltransferase AT5G59530 33.846 2.37e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3005 - - aip:107648447 572.392