Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2892 ATGAGACGCACTCCTTCGCCGAACCATCTGCTCGCCGCCGCCGTTGCCGCCGCCGACGCCACCTCAACAGCTGCCCTCACTACCACCTTAATTATGTCTTCGTGCCACCATTACCGAGGACGTGGGAGAGGATTCTCCGGGCGCTCCTACTCCAGTGGGAGAGGACAGAACGTTACTGGCGACGATCACTTCCGGTCAGTACGCGACACCAATTTGGGAATCCGGCGAGGAGAGAGAGGAAGATTCTCGAACCAAACACCATCGCAGCAGCAGCAGCAGTATCAGAATCAGTCTTATCATAGGGTTCCTCCGCCGCCGCAGCTTCAGAATCAGTCTTATAATAGGGTTCCTCCGCCGCCTCAGCTTCAGTATCAGTCTTATAATAGGGCTCCTTCGCCGCCTCAGCTTCAAAACTGTCAATTTCGCCACCCTGCGCCGCAGTTTCGGCCACCGCCTCCGCAGTATGATCACCGCAGGCCAGCGTTTCGTCCGCTGCAGAATCTCCGCCCACGGCCCCCGGACTATCGAGAGTGGGAACTTGCAACAGCGCCGTCGCCTCCTCCTCATTGTGAACGGTTTATAATTGTGTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAGTAAACTTTACTTCCACATACCACGACACATATTGGACTGGCAGTGGAGAAAGAAGAATCTAATTTTTGAGCTTGGTTTGTGGTCAGCTGATATCATGTGTTTACAGGAGGTTGACAGATTTAATGAGTTGGCCGAGGAATTGAAGCTCAAGGGCTACAGTGGCTGCTGGAAGATGCGTACAGGCAATCCAGTTGATGGATGTGCAATCTTTTGGCGAACATCAAGGTTCAATTTGTTATATGAAGAATGCATTGAGTTTAATAAGCTGGGACTTAGAGATAATGTTGCACAGATATGTGTRCTAGAGTTCAAAACTCAAAATGGATCTGTCCCGTCAAGCACGAAAGGTTCAAGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTATAATCCTAATAGAGGAGAAATTAAGCTTGGCCAGGTCAGAGTGCTAATTGATAGGGCTAAAGCTGTTTCTGAACTCTGGAATAATGCTCCTGTTGTTATCTGTGGCGATTTTAATTGCACCCCTAAGAGTCCTTTGTACAACTATATCTCAGAACAGAAGTTAGATTTGTCTGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCTGTAATTTGTGCATCAAGATTTTATGGTCCTAATTCAAGATCTGCTAATGGTTCAGTTCAGACCRCATCTAATGKGGGTGAYRAGGAAGTTAATATTGAACAAAATAATTCTTTGTCAGACATGCAGAATCCAGATTCCAAGAGTAACAGTTCAGAGAATCAATTTTCTGACACTATTTCGCATATGCCTGATAAGTCTCTGACAAATGTGCAGCATGATAAGGAGAGTGATGCATATGCAAGAAGGGATGTACAGGATACTGCTGTTGATCATTGCAAGACTTTTGGTGAAATTGAAAACATTGAAGAGTCAAATCCTACTTATAGTGAAGAACATGTATTGGATACTGTCCCAAGTTTAAATCAAGGAGCATCAAGTGAACATGTATCAGATGCCGTCACTACTTCAAAGCAAGAATCATCAAGCAAAATTTCCAGCTTACATTTTCCTGAAGGAAATGGAAAATTGGAGTCTGAATGCTCCTCGACGTCTCTCCAGGAAGATGATCATTCTTCCAGGGTCAATATAGATCTTGAGTCGACAAATATTCTCAATGAAGAAATTTGTTCAACTCCACTATCCAGCCAGAATCCAGTTTCTGATTCTTTTGAAGAACCTGATACTGGGTGCGGAGAAAGACCATCTGATGAGCTTCTCACCAATGACAAATTGAACAGCTCATCAACCTCTGTAGTAGTAGATAAATCACATCAATCCGCCAACATTGACTTTCCACTAGAAGAAAAACTAGAGAAATTGTTCTTTGATGAGGTAGATAAAACCATAGGCAATGAAAATATGGAAGATGACACGGCATTCATATCATCCTTTTATAACACTGAAGAAGGTGTGAGTCTTGATCTTGGTCCATCAATGAAATCAAATATTGAAAAATCATATGAGTTTGAGGAATCAGAATCTGCTTCCAACTTGCTGCTTGCAGAAAGCAATGAAGTGGATGGTGACTTGTCTTCAAGCTCAGCTTCTGAATATGTTAATGCTGAGAGAACCACTTACAACCCCTCATTTTGGACCCCAATGGACATAGAGACAGCAACAGGAAATTCAGAGTGCACATTCCTAGAGCATCCTTTACCACTCAGGAGCACATATACTGAAGCTATGGATTCTTCAGGGACCAGAGACCCCCATGGAGAGCCCCTGGTGACCAGTTATAATAGATGCTTTTTGGGCACTGTTGACTACATTTGGCGGTCCGAAGGTTTGCAGACAACCAGAGTTCTCGCTCCAATACCTAAACATGCCATGGAATGGACTCCTGGATTTCCAACAAAGAAATGGGGTAGTGATCACATTGCCTTGGCTTCAGAATTGGCAATCTTAAAAGATGGTACCCAAGTCCGCAATGATGTTTAA 2607 0.4392 MRRTPSPNHLLAAAVAAADATSTAALTTTLIMSSCHHYRGRGRGFSGRSYSSGRGQNVTGDDHFRSVRDTNLGIRRGERGRFSNQTPSQQQQQYQNQSYHRVPPPPQLQNQSYNRVPPPPQLQYQSYNRAPSPPQLQNCQFRHPAPQFRPPPPQYDHRRPAFRPLQNLRPRPPDYREWELATAPSPPPHCERFIIVSYNILADYLALDHRSKLYFHIPRHILDWQWRKKNLIFELGLWSADIMCLQEVDRFNELAEELKLKGYSGCWKMRTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLEFKTQNGSVPSSTKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLIDRAKAVSELWNNAPVVICGDFNCTPKSPLYNYISEQKLDLSGIDRNKVSGQASAVICASRFYGPNSRSANGSVQTXSNXGDXEVNIEQNNSLSDMQNPDSKSNSSENQFSDTISHMPDKSLTNVQHDKESDAYARRDVQDTAVDHCKTFGEIENIEESNPTYSEEHVLDTVPSLNQGASSEHVSDAVTTSKQESSSKISSLHFPEGNGKLESECSSTSLQEDDHSSRVNIDLESTNILNEEICSTPLSSQNPVSDSFEEPDTGCGERPSDELLTNDKLNSSSTSVVVDKSHQSANIDFPLEEKLEKLFFDEVDKTIGNENMEDDTAFISSFYNTEEGVSLDLGPSMKSNIEKSYEFEESESASNLLLAESNEVDGDLSSSSASEYVNAERTTYNPSFWTPMDIETATGNSECTFLEHPLPLRSTYTEAMDSSGTRDPHGEPLVTSYNRCFLGTVDYIWRSEGLQTTRVLAPIPKHAMEWTPGFPTKKWGSDHIALASELAILKDGTQVRNDV* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2892 868 MobiDBLite consensus disorder prediction 81 142 - -
Amo06g2892 868 Pfam Endonuclease/Exonuclease/phosphatase family 197 397 IPR005135 GO:0003824
Amo06g2892 868 MobiDBLite consensus disorder prediction 477 495 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 61 76 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 586 613 - -
Amo06g2892 868 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 44 858 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 423 495 - -
Amo06g2892 868 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 44 858 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 520 558 - -
Amo06g2892 868 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 423 476 - -
Amo06g2892 868 Gene3D Endonuclease/exonuclease/phosphatase 708 867 IPR036691 -
Amo06g2892 868 Gene3D Endonuclease/exonuclease/phosphatase 166 492 IPR036691 -
Amo06g2892 868 SUPERFAMILY DNase I-like 186 395 IPR036691 -
Amo06g2892 868 MobiDBLite consensus disorder prediction 38 170 - -
Amo06g2892 868 MobiDBLite consensus disorder prediction 511 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2892 Amo-Chr6 94491682 94499484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2892 - - adu:107495335 1646.71