Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2838 ATGAATAAAGTTTGTTGGCCTTACTTTGATCCTGAGTTTGATAGTCTCACTGAAAGAATATATGGCCCACCTTGCCGAGTCAGCATTGACAATGAAAGCATGGATGGATGCACAGTAGTGAAGGTAGATAGTGTTAACAAACAAGGTCTTCTTTTAGAAGTGGTGCAAGTTTTGACGGACATGAACCTTCAAATCTACAAAAGCTTTATTTCATCTGATGCTGGCTGGTTCATGGATGTGTTTCATGTTAGAGATGAACATGGTAACAAACTAACCGACCAGAAAGTCATCAACTATATCCAGCGGGCAATAGGAAGATCAAGAGGGTTTTCATCTCAATTATCCTCACAAAGCAACAGCATCATCTATAATCCGTACATGACCACAACAAATTCCTACTCCTACAACAACAATAATGTCTTCCCATATGATGGCCACCCAAATGAGCAGCATACCGCCATCGAATTGACCGGAGCCGACCGCCCCGGCCTGCTCTCGGAGATCTCGGCTGCCCTAACTGACCTCCATTGCAACGTAGTTGAGGCTCATGCATGGAGCCACAATGCCAGGCTGGCATGTGTGGCCTACATTTCAGATCAATCCACGGACACGGCCATCGATGACCCTAGTCGTCTGGCAACAATCCAGGGTCATCTCACCACGGTGCTTAGGGCAACCACAGATCCTAATGAAAAGGGTCTGGACAGTAGCCCTAACCACCCTGATGTGAAGACCTCGGAATTTCTTGGAGGCGAAGGCACCATGACGACCGTGGAGAGGAGGTTGCACCAGATGATGCTTAGTGTTAGGGACTTTGAGAGTCCTTCAACAAAAGAGAGAAGGAAGAGAATGGTGAAGATTGAAAGCTGTGATGAAAAGGGTTATTCAATTGTGAGCATAGATTGTAAGGACCGTCCAAGACTCATGTTTGATACCGTTTGCACCTTAACGGATATGCAGTACGTCATTTTCCATGCTTCCATTAGCTCCCATGAAGCCTATGCATTTCAGGAGTATTTCATCAGGCATATAGACGGATATGCTTTGAACACAGCAAGCGAGAAGGAAAGAGTAATTAACTGCTTAGAAGCAGCCATAGAACGCCGGGTTTGTGAGGGAGTTAGGCTAGAATTGTGTGCAGACAACAGAATAGGGTTGCTTTCTGACATAACAAGAGTTCTGAGGGAGAATGGTGTTGTTGTGGTGAGAGCCGATGTAGAAACTCATGGAGACAAAGCTGTGAATGCATTCTATGTGAGAGACATATCAGGGAAAGAGGTTGACATTGATTACTTCAGTAAGTCTCTGAAGAGAGAAATGGGTCCAATATTCACCCTCCATGTCAAGAATGAGACTCCTATCACCATGAGAAGAACAAGCTCAAACTCATCATCATCAAGTTCAAGCTCATCAGGCTCTGATGATGAATGGTCTAGTCTCTCTTTTGGAGGCAAATTAAGGTACCGTATAGGACAACTTTCTCATCGCTTGATTCATGTATGA 1503 0.4471 MNKVCWPYFDPEFDSLTERIYGPPCRVSIDNESMDGCTVVKVDSVNKQGLLLEVVQVLTDMNLQIYKSFISSDAGWFMDVFHVRDEHGNKLTDQKVINYIQRAIGRSRGFSSQLSSQSNSIIYNPYMTTTNSYSYNNNNVFPYDGHPNEQHTAIELTGADRPGLLSEISAALTDLHCNVVEAHAWSHNARLACVAYISDQSTDTAIDDPSRLATIQGHLTTVLRATTDPNEKGLDSSPNHPDVKTSEFLGGEGTMTTVERRLHQMMLSVRDFESPSTKERRKRMVKIESCDEKGYSIVSIDCKDRPRLMFDTVCTLTDMQYVIFHASISSHEAYAFQEYFIRHIDGYALNTASEKERVINCLEAAIERRVCEGVRLELCADNRIGLLSDITRVLRENGVVVVRADVETHGDKAVNAFYVRDISGKEVDIDYFSKSLKREMGPIFTLHVKNETPITMRRTSSNSSSSSSSSSGSDDEWSSLSFGGKLRYRIGQLSHRLIHV* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2838 500 SUPERFAMILY ACT-like 34 99 IPR045865 -
Amo06g2838 500 ProSiteProfiles ACT domain profile. 39 118 IPR002912 -
Amo06g2838 500 CDD ACT_ACR_1 37 108 - -
Amo06g2838 500 MobiDBLite consensus disorder prediction 454 478 - -
Amo06g2838 500 MobiDBLite consensus disorder prediction 228 243 - -
Amo06g2838 500 ProSiteProfiles ACT domain profile. 375 453 IPR002912 -
Amo06g2838 500 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR2 2 498 - -
Amo06g2838 500 ProSiteProfiles ACT domain profile. 153 239 IPR002912 -
Amo06g2838 500 Gene3D - 148 228 - -
Amo06g2838 500 Gene3D - 374 440 - -
Amo06g2838 500 MobiDBLite consensus disorder prediction 228 249 - -
Amo06g2838 500 CDD ACT_ACR_3 295 369 - -
Amo06g2838 500 SUPERFAMILY ACT-like 148 222 IPR045865 -
Amo06g2838 500 CDD ACT_ACR_2 152 225 - -
Amo06g2838 500 SUPERFAMILY ACT-like 372 438 IPR045865 -
Amo06g2838 500 MobiDBLite consensus disorder prediction 454 479 - -
Amo06g2838 500 Pfam ACT domain 375 420 IPR002912 -
Amo06g2838 500 Pfam ACT domain 153 208 IPR002912 -
Amo06g2838 500 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 498 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2838 Amo-Chr6 93755290 93758419 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2838 - - ahf:112697508 966.066