Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2833 ATGGATACACTGCCAACGACGTCGTCTAAGAGCGAACGGAGAAGTGGTAGATCGAAGGCTGCTCAGACCTCTAAGTCTTCTCTCGTCATGGCTTTCTTTTCTTGCGTCGCTTGGCTTTACGTTGCCGGCAGGTTGTGGCAGGATGCAGAGAATCGCAATTTGCTTGCTACACTTTTAAAGAAGAATTCAGCACAGAGGTCCAAGGTTATTACTGTGGAAGATAAGCTAATGATTCTAGGGTGCAAGGATCTGGAGAGGAGGATTGTGGAAGCTGAGATGGATTTGACATTGGCAAAGAGCCAAGGGTTCCTAAAAGGCCAGTCGCAGAAAAGTGGCTCTTCTGATCCTAAGCTTCTTGCTGTTATTGGTGTCTACACTGGATTTGGAAGCAAATTGAGAAGAAATGTTGCCCGAGGGTCTTGGATGCCCAGAGGCGATGCTTTGAAAAAACTTGAAGAAAGAGGAGTGGTCATACGTTTTGTAATTGGTCGGAGCGCTAATCGAGGTGATAGCTTAGATCGCAATATTGATGAAGAAAATCGCTCAACAAAGGATTTCTTGATTCTTGAAGGTCATGAGGAAGCTCAAGAAGAGTTGCCTAAGAAAGCAAAAATCTTCTTTAGTACTGCAGTTCAAAACTGGGATGCTGACTTTTATGTCAAAGTTGATGACAGTATTGACATTGATCTGGAGGGATTAATTGACCTTCTTAACCGCCGCCGCGATCAGGATGGGGCATATATTGGATGCATGAAATCTGGAGAAGTGATATCAGAAGAGGGCAAGGCATGGTACGAGCCTGAATGGTGGAAATTTGGGGATGAAAAGTCGTATTTTCGACATGCAGCTGGTTCACTTGTTATAATTTCAAAGAATTTGGCGCAGTATATTAACATAAACAGTGCATCTTTGAAGACTTATGCCTATGACGATACATCGTTGGGATCTTGGATGATGGGTGTCCAAGCAACCTATATAGACGATATTCGCCTTTGCTGCAGTAGCATCAGTCAAGATAAGGTTTGTTCCTTGGCATGA 1038 0.4374 MDTLPTTSSKSERRSGRSKAAQTSKSSLVMAFFSCVAWLYVAGRLWQDAENRNLLATLLKKNSAQRSKVITVEDKLMILGCKDLERRIVEAEMDLTLAKSQGFLKGQSQKSGSSDPKLLAVIGVYTGFGSKLRRNVARGSWMPRGDALKKLEERGVVIRFVIGRSANRGDSLDRNIDEENRSTKDFLILEGHEEAQEELPKKAKIFFSTAVQNWDADFYVKVDDSIDIDLEGLIDLLNRRRDQDGAYIGCMKSGEVISEEGKAWYEPEWWKFGDEKSYFRHAAGSLVIISKNLAQYININSASLKTYAYDDTSLGSWMMGVQATYIDDIRLCCSSISQDKVCSLA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2833 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo06g2833 345 Coils Coil 81 101 - -
Amo06g2833 345 Pfam Domain of unknown function (DUF4094) 24 101 IPR025298 -
Amo06g2833 345 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g2833 345 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT3 3 341 - -
Amo06g2833 345 Pfam Galactosyltransferase 133 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo06g2833 345 Gene3D - 133 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2833 Amo-Chr6 93646427 93651331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2833 77 345 Glycosyltransferase AT2G25300 80.370 3.89e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2833 K20854 - gmx:100816327 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3664 16 147464815 147469897 Amo06g2833 06 93646427 93651331 hybridization