Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2796 ATGGTGGCCTCCGCCGCAGTCGCCGGCGTCTCTCTGACGGCGCATCAGCGCAATATTCTAGCTGGTGTTAACGCCGGCGCTTCGAGCCTCTCATTCGTTGGTTCAGGCTTCATCGTTCTCTGCTATCTCCTSTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTCTTCTACCTCGCCCTCTCCGATATGCTTTGCAGTTTCTTCAGCATAGTAGGGGATCCATCAAAAGGTTTCTTTTGCTCTGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTCCTATGGACCACAACAATTGCTTTTACCCTGCATCGAACTGTTGTTAAGCACAAAACAGATGTTGAAGAGTTTGAGGCAATGTTTCACTTGTATGTCTGGGGTACTTCCCTGGCTATGACAGTTATACGTTCATTTGGTAATGATCATAGACATCTTTCTGCATGGTGTTGGACTCAATCAGGACTTGCAGGGAAGGCAATTCATTTGTTAACATTTTACATGCCACTCTGGGGTGCTATACTATATAATGGGTTCACATACTTCCAAGTTATACGCATGCTGAACAATGCAACCCGTATGGCAGTTGGTATGTCAGGCCAACCTTATGCATCAGATGCACGGGATAACATGAGGGCTCTAAATCGCTGGGGATACTATCCACTGATTCTAATAGGATCATGGGCTTTTGGAACCATTAACCGTATTCATGATTTCTTTGAACCCAACCATAAGATCTTCTGGCTCTCATTTCTAGATGTCGGAATGGCTTCTCTTATGGGCCTCTTTAATTCAATTGCATATGGCCTTAATTCTTCTGTTCGTCGAGCAATTTGTGAAAGAGTGGACAAGTATTGGCCTGAGGGTCTTAAGAGATGGCTCCCTATCAATTTCAAGTACAAGGCCTTAACGCAAGAAAGTGAACTAGTATTGTTAAGTACTGATGGTCAGCGATAA 963 0.4476 MVASAAVAGVSLTAHQRNILAGVNAGASSLSFVGSGFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIVGDPSKGFFCSAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFEAMFHLYVWGTSLAMTVIRSFGNDHRHLSAWCWTQSGLAGKAIHLLTFYMPLWGAILYNGFTYFQVIRMLNNATRMAVGMSGQPYASDARDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPNHKIFWLSFLDVGMASLMGLFNSIAYGLNSSVRRAICERVDKYWPEGLKRWLPINFKYKALTQESELVLLSTDGQR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 20 35 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 37 51 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 53 75 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 83 96 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 98 116 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 121 136 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 160 172 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 173 196 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 216 237 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 246 263 IPR022340 -
Amo06g2796 320 PRINTS Putative plant GPCR, GCR1, signature 264 280 IPR022340 -
Amo06g2796 320 PRINTS GCR1-cAMP receptor family signature 31 49 IPR022343 -
Amo06g2796 320 PRINTS GCR1-cAMP receptor family signature 50 65 IPR022343 -
Amo06g2796 320 PRINTS GCR1-cAMP receptor family signature 81 99 IPR022343 -
Amo06g2796 320 PRINTS GCR1-cAMP receptor family signature 222 240 IPR022343 -
Amo06g2796 320 PRINTS GCR1-cAMP receptor family signature 254 273 IPR022343 -
Amo06g2796 320 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 11 290 - -
Amo06g2796 320 Gene3D - 13 293 - -
Amo06g2796 320 SUPERFAMILY Family A G protein-coupled receptor-like 13 283 - -
Amo06g2796 320 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 20 274 IPR017981 GO:0004888|GO:0007166|GO:0016021
Amo06g2796 320 PANTHER TRANSMEMBRANE PROTEIN 116 11 290 - -
Amo06g2796 320 Pfam Slime mold cyclic AMP receptor 29 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2796 Amo-Chr6 92793748 92799539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2796 K22987 - gmx:100802104 565.459