Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2784 ATGGACGAACAACAACAACGGCAACGACCTCATCAATCTCACGCATCCAAAGACCCTTTCCTTCTCAATTACCAACCTTCGGAGCTTCGAATTGCTTCTGAGTTCTTCACGAATTGGCTCCCTTTCCTCTCCAAAGATCTCTGCAACCACTGCACCCAATCGCTCTCCGATCGAATCCGCTCCATCGACCCAGAACTCTCCCATTGTGGTGGTCAAAAGGAAGTTTCCAATGGTTCAGAGGTTTGCAATGGCCAAATGAATGAGAACAGCGACAATCATGACGATAATTGTGACACTCACTCAATTGGGAGTTGGAAAGATGGTGCTGAGGCTAATTCACCAATTGAGACGCCGAGTCCGCGCATGTCATGGGCTGATATGGCTCAAGAAGATGAGTTTGGTGAAGAAGAGCATGAAACCATCAATGGCAGTACAGCCGTGCCAGCTTCTAATTCAAACCTTGAAGAAGTGGCTAAAGCTACCCCGGAGAAGCCTACTTTGCCTAGGGAGCAAAGAGAATACATTAGGTTCATGAATGTGAGGCGTAAGAAGGATTTCATGTGCTTTGAGAGAGTTAATGGAAAGCTTGTTAACATCCTTGAAGGGATCGAACTCCACACGGGTATTTTTAGTGCTGCTGAACAGAAAAGGATAGTCAATTATGTTGCTTCCCTGCAGGAGATGGGAAGGAAAGGGGAACTGAAAGATCGGACATTTTCGGCTCCTCAAAAGTGGATGAGGGGGAAGGGACGTCAAACTATCCAATTTGGATGCTGTTACAACTATGCAGTGGATAGAGATGGTAACCCACCTGGTATTCTTCAAAGTGAAATGGTAGATCCTATACCTGATCTTTTTAAGGTCATCATTCGAAGGCTGATCAAGTGGCATGTACTCCCTCCGACTTGCGTGCCAGACAGCTGCATCGTAAATATCTATGAAGAAGGGGATTGTATACCTCCACACATAGATAATCATGATTTTGTTCGGCCATTCTGCACGGTTTCTTTTCTCAGTGAGTGCAACATACTCTTTGGATCAAATCTGAAGGTTATAGGCCCTGGTGAATTTGATGGCTCACTTGCTATTCCCCTGCCCGTTGGGTCTGTACTTGTCCTAAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTTCCTGCAGTTCCTACTAAAAGGATTTCAATCACATTTAGAAGAATGGATCCTGCGAAGCGGCCTATGGGGTTTGTACCAGAACCTGATCTTCAGGGTATCCAGCCATTGGCCTATGATAATGACAAGGAAAAGAAATCAACCGGATTGAGATCTAATCGTAATCCTAGAAGAAATAGAGACAGGAGAGGTGGCAGAAATGAAGGAATGGGATCTGCGACTAGAGGCGATAGATATTCAGATCCCCGCGAGTCGAATCATAGTTCACAAAGATCATATTCAGAGCCCCGTGAGTCAAATCATAGTTCACAAAGATCTTCAAATCGGTGGAGTAGGGGAAGGCCTAGCAGTTGA 1506 0.4535 MDEQQQRQRPHQSHASKDPFLLNYQPSELRIASEFFTNWLPFLSKDLCNHCTQSLSDRIRSIDPELSHCGGQKEVSNGSEVCNGQMNENSDNHDDNCDTHSIGSWKDGAEANSPIETPSPRMSWADMAQEDEFGEEEHETINGSTAVPASNSNLEEVAKATPEKPTLPREQREYIRFMNVRRKKDFMCFERVNGKLVNILEGIELHTGIFSAAEQKRIVNYVASLQEMGRKGELKDRTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILQSEMVDPIPDLFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNILFGSNLKVIGPGEFDGSLAIPLPVGSVLVLNGNGADVAKHCVPAVPTKRISITFRRMDPAKRPMGFVPEPDLQGIQPLAYDNDKEKKSTGLRSNRNPRRNRDRRGGRNEGMGSATRGDRYSDPRESNHSSQRSYSEPRESNHSSQRSSNRWSRGRPSS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2784 501 MobiDBLite consensus disorder prediction 423 452 - -
Amo06g2784 501 MobiDBLite consensus disorder prediction 403 501 - -
Amo06g2784 501 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 304 401 IPR005123 -
Amo06g2784 501 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g2784 501 PANTHER RNA DEMETHYLASE ALKBH9B 110 491 - -
Amo06g2784 501 MobiDBLite consensus disorder prediction 476 501 - -
Amo06g2784 501 SUPERFAMILY Clavaminate synthase-like 199 400 - -
Amo06g2784 501 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 110 491 IPR044842 GO:0003729|GO:0006402|GO:0032451
Amo06g2784 501 MobiDBLite consensus disorder prediction 461 475 - -
Amo06g2784 501 Pfam 2OG-Fe(II) oxygenase superfamily 205 398 IPR027450 -
Amo06g2784 501 PANTHER RNA DEMETHYLASE ALKBH9B 11 108 - -
Amo06g2784 501 MobiDBLite consensus disorder prediction 82 121 - -
Amo06g2784 501 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 11 108 IPR044842 GO:0003729|GO:0006402|GO:0032451
Amo06g2784 501 Gene3D - 186 407 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2784 Amo-Chr6 92627196 92631154 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2784 K10767 - gmx:100797674 733.406