Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2782 ATGGAACTTGGTTTGAAGAGAAAGTTACCACAAAATAACTTTTCTATGGATGAACTCAATGAAGATCTCTTGGAAAGGATACTTTCATGGCTCCCAACTTCAGCATTCTTTCGCCTCAATTCTGTCAGCAAAAGATGGAAATCTGCTGCTAATTCTGTGAGTTTCAAGCTTGCCTGCTCGCAAATTCCTTCCCGGGATCCTTGGTTCTTGATGGTTGCTCCAAACCTCAAGCAATCTGTTGTGTTTAACTCTGCTGAAAACAGTTGGAAAAGGCTCAATTATCCGTGCCATCTTCGCGAAGATTCCGACCAAGGTTGCATGCCAGTTGCAGCCTCTGGTGGCCTAGTTTGCTACCGGAAATCGTCCGGAAATTTCATCGTGTGCAATCCGGTGACAGGGTCTTGTAGTGAACTCCCTCCATTGCATTTTGCCTCAGAAAATCATCAATCTCTCAATGCAGTTGTGATGAGTAGTACAACTTCAAATGGCCAACAATCCTACAAGATTGTGTTGGTTCTTGGTGAAATTCCAAATCTTTTCCTTAAACTCTACAATTCAACCTCTGGTTGTTGGGAAGATGAGTCTGCACTGAAGAAGAATGTTGATGATAGTTCAATGGATTGTGATTCGACCGATGCCAATGTTGTTTACTTCCTTAGCACAACAGGAACTGTGGTTGCTAGTAACATGCAGAGAAGCCCATCAAAGCAATATTCATCAGTTATTACTAACAAAGACGGCCGGGAGACAGTCTACTTCCTTAGCTCGTCCGGAACAGTAGTAGCTTGTAATTTGGCAGACAAGTCCTTCTTTGAGTATCCCAGGTTGTTGCCTGTTTTCAGCGAGTATTCTATCGATATTGCAGTGTGTAATGGTGAATTGGTAGTTGTTCTGCTATCAGAATTCTTGGAGAGTGCTAGTCTTAGGGTGTGGAAATACGACGAGGCTAACCGGCGCTGGCAACAGATTGTAGTGATGCCAGCAGCTATGTCTCATGAGTGGTATGGAAGGAAGGTGGATATTAACTGCGTCGGAGCAGGCGATCGGATATTTATATGCTTGAACTCTCCTGAGATTTGCACTTATATAGTCTGTGATTTGGTGACCAACACTTGGGTTGAATTGCCAAAATGTTGCATTAATGGTGAAGTCATGGAATTCATGTCTGCATTTTCATTTGAGCCTAGGATAGAGGCTTCTGTATGA 1206 0.4312 MELGLKRKLPQNNFSMDELNEDLLERILSWLPTSAFFRLNSVSKRWKSAANSVSFKLACSQIPSRDPWFLMVAPNLKQSVVFNSAENSWKRLNYPCHLREDSDQGCMPVAASGGLVCYRKSSGNFIVCNPVTGSCSELPPLHFASENHQSLNAVVMSSTTSNGQQSYKIVLVLGEIPNLFLKLYNSTSGCWEDESALKKNVDDSSMDCDSTDANVVYFLSTTGTVVASNMQRSPSKQYSSVITNKDGRETVYFLSSSGTVVACNLADKSFFEYPRLLPVFSEYSIDIAVCNGELVVVLLSEFLESASLRVWKYDEANRRWQQIVVMPAAMSHEWYGRKVDINCVGAGDRIFICLNSPEICTYIVCDLVTNTWVELPKCCINGEVMEFMSAFSFEPRIEASV* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2782 401 Gene3D - 70 393 IPR015915 GO:0005515
Amo06g2782 401 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 11 401 - -
Amo06g2782 401 Pfam F-box domain 17 56 IPR001810 GO:0005515
Amo06g2782 401 SUPERFAMILY F-box domain 14 71 IPR036047 GO:0005515
Amo06g2782 401 ProSiteProfiles F-box domain profile. 13 58 IPR001810 GO:0005515
Amo06g2782 401 SMART fbox_2 19 59 IPR001810 GO:0005515
Amo06g2782 401 Gene3D - 10 55 - -
Amo06g2782 401 SUPERFAMILY Galactose oxidase, central domain 68 329 IPR011043 -
Amo06g2782 401 PANTHER F-BOX/KELCH-REPEAT PROTEIN 11 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2782 Amo-Chr6 92618634 92619839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2782 - - aip:107648534 793.882