Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2781 ATGCTGGTGGCGGAAGGAACAGAGTGGGATCTGAAGTGGTTCCTTCAGTGGCTCTCCGCACTTGTTATCGCCCTTGCCTTGCACACTTTCGTTAAGGACACAGCCTCTAAGTACTTTCAACGGAACAGCAATAACCGTTTCGATAACCACCTCCAACAACCAATGCCTGGCGTTCTCGACGACCCTTCCTGCGCCGCGTGTGGAGCACGCGCCACCAAGAAGTGCTCGCGATGCAAAGCTGTTCGATACTGCTCGCAAGAATGCCAACAGTCACATTGGAAGTCCGGACATAAGGCGAAGTGTACAGTAAATTCGAATAAAAATGGGACTAACAATTGTGTGTCAAAGCCTTCGGCAGCTGGGGAGAAAAGTTCATCTTCAATTGCATTGATACCAAGTTCCAAAACTTCGAGGCCTATCAAGAAGCCTAAAGATGTTCTTTTTCCTTACGATGAATTCATTAAATTCTTTAACTCGGAAAAGCCAGGATTTCCTCCTTGTGGACTCCTGAATTGTGGAAACAGGCATGTCCTTGTCACTCACAAGATTTGGCTTAATAATGCTGGAAAAATTTGCTTTGGAAATGTGGTTCTTCAGTGTCTCTCATTCACAAGGCCACTTGTTGCGTACTTGTTGGAAAAGGGCCACCACAGAGAATGCAGTTGCAATAGTGATTGGTGCTTTCTTTGTGAATTTGAAGCTCATGTTGAAAGAACAAGGTCAAGTTCTCAGGCATTTTCTCCGACCAGTATTCTTTCCCGTTTGTCTAATATTAGTGGTACTTTGGGTTGTGGAAGTCAAGAAGATGCTCATGAGTTCATGAGATTATGCATTGATGCTATGCAATCTGTTTGCCTTGATGAATTTGGTGGAGAGAAGGCCGTCCCTCCTAAGCTTCAGGAAACAACTCTTATTCAACACATTTTTGGTGGCCGGCTTCAATCCGAGGTGTTTTGCACAAAATGCGAAAATATTTCAAAACAGTATGAAAATATGATGGACTTGACTGTTGAAATTCATGGAGATGCTGCCTCCTTAGAAGAATGTCTAGACCAGTTTACAGCCAAGGAGTGGCTCCATGGAGAAAATATGTATAAATGTGATGGGTGCAAAGACTATGTTAAGGCGTGGAAGCGTCTCACTGTGAATCGTGCCCCGAATATTCTTACAATTGCCTTAAAAAGATTTCAGAGTGGCAGGTTTGGAAAGCTTAACAAGAGAATATCATTCCCTGAGACTTTAAATCTTAGCCCCTATATGAGTGAAGCTGGAGATGGATCTGACATTTACAAGCTATATGCTGTTGTAGTCCATATTGATATGCTAAATGCTTCATTCTTCGGCCACTATATCTGCTACATCAAGGATTTCAACGGAAACTGGTATAGGATTGATGATTGGAAGGTCACGAAGGTGGACATGGAGGAGGTACTTTCTCAAGGTGCATACATGCTATTGTATAACAGGTCTAGTGCTCAACCATCCAGCCTTCAAATTCAAGCAACGGAATCATCAGAACCAGCACTGGCGCAAACGGTTAAGGTGGAACGAGAGCAAGGTCCAAATGAACTAGTTGAATGCCTCTCAAATATGAATGCTCAGGCTGCGACTTGCAATGGAGCTCGCGAGGTTTCTCCATCTTATAGTAGTCCAGAACCGAAGGTCTCTGGCAACAAATATGAGCCTCTGTCTGGAATGAACGCTGATGCCAAAGGAGAGCATTCTGAGGATGTCGATATTAGTGATGCTGAGCCAACGGATGTTACAAATATTTCCAGTAGTAAAGTTGAATCATCCGACATACCCATTTCTCCAGCCGACAAAGATTCACGGAACGTAGACATGGACCAATCCCAAGCGAAGACATCTAGCTGCACAGAAAAGAAAGACGACACTCATACAGTTAGGTCTGGCCCCTCTGCAGTTTCGCCAACCAATTTTGCTGTTTCAATGGGTCGTCAAAACATGGGAGAGAACTTGGAACATAATACAGAAGTGGTTAAATGCAAGTTGTCAACAACAAAAGATAATGCATACTGTGCCAATGGCAATGGCAACGGCAACGGCTATGCCAGTGCTAACAAATCCATTACTGCAGTTGAGGATGCTGAAACTGACCAAGGAAATGAAGCTAACAAAGTAGGAATAAAAGGGGACAAGTTAATAATGTAG 2172 0.4365 MLVAEGTEWDLKWFLQWLSALVIALALHTFVKDTASKYFQRNSNNRFDNHLQQPMPGVLDDPSCAACGARATKKCSRCKAVRYCSQECQQSHWKSGHKAKCTVNSNKNGTNNCVSKPSAAGEKSSSSIALIPSSKTSRPIKKPKDVLFPYDEFIKFFNSEKPGFPPCGLLNCGNRHVLVTHKIWLNNAGKICFGNVVLQCLSFTRPLVAYLLEKGHHRECSCNSDWCFLCEFEAHVERTRSSSQAFSPTSILSRLSNISGTLGCGSQEDAHEFMRLCIDAMQSVCLDEFGGEKAVPPKLQETTLIQHIFGGRLQSEVFCTKCENISKQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHGENMYKCDGCKDYVKAWKRLTVNRAPNILTIALKRFQSGRFGKLNKRISFPETLNLSPYMSEAGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFNGNWYRIDDWKVTKVDMEEVLSQGAYMLLYNRSSAQPSSLQIQATESSEPALAQTVKVEREQGPNELVECLSNMNAQAATCNGAREVSPSYSSPEPKVSGNKYEPLSGMNADAKGEHSEDVDISDAEPTDVTNISSSKVESSDIPISPADKDSRNVDMDQSQAKTSSCTEKKDDTHTVRSGPSAVSPTNFAVSMGRQNMGENLEHNTEVVKCKLSTTKDNAYCANGNGNGNGYASANKSITAVEDAETDQGNEANKVGIKGDKLIM* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2781 723 CDD Peptidase_C19E 166 487 - -
Amo06g2781 723 MobiDBLite consensus disorder prediction 585 600 - -
Amo06g2781 723 MobiDBLite consensus disorder prediction 542 644 - -
Amo06g2781 723 SUPERFAMILY HIT/MYND zinc finger-like 62 103 - -
Amo06g2781 723 Pfam Ubiquitin carboxyl-terminal hydrolase 185 487 IPR001394 GO:0004843|GO:0016579
Amo06g2781 723 ProSiteProfiles Zinc finger MYND-type profile. 64 101 IPR002893 -
Amo06g2781 723 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 19 675 - -
Amo06g2781 723 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 675 - -
Amo06g2781 723 ProSitePatterns Zinc finger MYND-type signature. 64 101 IPR002893 -
Amo06g2781 723 Pfam MYND finger 64 101 IPR002893 -
Amo06g2781 723 Gene3D - 58 107 - -
Amo06g2781 723 SUPERFAMILY Cysteine proteinases 185 494 IPR038765 -
Amo06g2781 723 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 183 490 IPR028889 -
Amo06g2781 723 Gene3D Cysteine proteinases 182 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2781 Amo-Chr6 92607624 92613767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2781 6 526 Miscellaneous Gene Families AT4G31670 59.322 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2781 K11855 - gmx:100799652 899.812