Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2675 ATGATGGCAGCCTCATCCTCCCTCTCCAACTTCTTCTCATTCCTCTTACCCTCAAAACAACCGCCACCATCTCCGTCGCCACCGCCYCCACAAATCGCCATAACCACTCGCCACAAGCCCACTCCCAACTCCGTCTCCCTCGTCGCCCAAKAACAGCAACATGACCCCTCGTCTTCTTCTTCTTCTTCCTCCTCGGAGCTRTCTTCAGTGATGTGCCCTTCCCTGGCGCACGCGAACACGCTGTTCTTCCGATCGGCGTACAATGTGCAGGTGGTGGTAGACGACAACGAGCCCGAGGAGAGGCTCCTCAACAGGTTCCGCCGGGAAGTTATGAAGGCCGGCGTCATTCAAGAGTGCAAGCGCCGGAGGTTCTTTGAGAACAAACAGGACCAGAAGAAGCGCAAGTCTCGCGAAGCTGCCAAGCGTAACAAACGTAGCAGGCGCCCACCGATGAGATCTCCAATGCAGAACAGGCAGGATGTCCTCTCAACAACAACTAAGAAGGAGGAAGATGATGATAACTGGGATCTACCTGAAGAAGACGGATTGAGCGCATGA 558 0.5466 MMAASSSLSNFFSFLLPSKQPPPSPSPPPPQIAITTRHKPTPNSVSLVAQXQQHDPSSSSSSSSSELSSVMCPSLAHANTLFFRSAYNVQVVVDDNEPEERLLNRFRREVMKAGVIQECKRRRFFENKQDQKKRKSREAAKRNKRSRRPPMRSPMQNRQDVLSTTTKKEEDDDNWDLPEEDGLSA* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2675 185 MobiDBLite consensus disorder prediction 126 185 - -
Amo06g2675 185 MobiDBLite consensus disorder prediction 1 67 - -
Amo06g2675 185 MobiDBLite consensus disorder prediction 36 67 - -
Amo06g2675 185 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 2 181 - -
Amo06g2675 185 MobiDBLite consensus disorder prediction 137 151 - -
Amo06g2675 185 TIGRFAM S21p: ribosomal protein bS21 89 145 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 MobiDBLite consensus disorder prediction 18 35 - -
Amo06g2675 185 Hamap 30S ribosomal protein S21 [rpsU]. 88 144 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 Gene3D Ribosomal protein S8 103 141 IPR038380 -
Amo06g2675 185 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 2 181 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 PRINTS Ribosomal protein S21 family signature 112 122 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 PRINTS Ribosomal protein S21 family signature 124 134 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 PRINTS Ribosomal protein S21 family signature 92 100 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 PRINTS Ribosomal protein S21 family signature 100 109 IPR001911 GO:0003735|GO:0005840|GO:0006412
Amo06g2675 185 MobiDBLite consensus disorder prediction 1 17 - -
Amo06g2675 185 Pfam Ribosomal protein S21 90 143 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2675 Amo-Chr6 90704235 90706105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2675 - - mnt:21400598 189.119