Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2517 ATGAATTATTTCCCAGACGAGGTAATAGAGCATATATTTGAGTATGTAGGTTCACACCGTGATAGGAACGCTTTATCTTTAGTGTGCAGGAGCTGGTACAGAATAGAGAGATGCACAAGAGAGAAAGTGTTCATTGGTAACTGCTACTCTATAACCCCTGAGAGGTTGATTCAGAGGTTCCCTTCTTTGAAGTCTCTGACTTTGAAGGGGAAGCCTCACTTTGCTGACTTCAGCTTGGTCCCTCATGGCTGGGGTGGATTTGTGTATCCATGGATTGAAGCACTTGCTAAGGGGAAGGTTGGGTTGGAGGAGCTTAGGTTGAAGAGAATGGTTGTCTCTGATGAGAGCCTTGAGCTTCTTTCTCGTGCTTTCCCTAATTTCAAGAGTCTTGTTCTTGTTAGCTGTGAAGAGTTCACTACTGATGGTCTTGCTGCTATAGCTGCAAATTGCAAGTGGCTTCGAGAACTTGACCTTCAAGAAAATGAAGTTGATGATCACAAGGGTCAGTGGCTTAGTTGCTTCCCCGACAGCTGCACGTCGCTTGTCTCTCTTAATTTTGCTTGCCTTAAAGGAGAGATTAATACTGGAGTGCTTGAGAGACTTGTTGCAAGATCTCCTAACCTTAAGAGCTTAAGATTAAACCGCTCTGTGCCCCTTGACGCACTCCAGAGGATATTGGCGCGAGCCCCTCAGCTAGTAGATTTGGGAGTAGGGTCATTAGTCCATGATCCAGCTATGGAGACCTTCGCCAAGCTAATGACTACCATGAATAAGTGCAAGTCAATAACAAGCTTGTCGGGATTTTTGGAAGTTACTCCTCGCTGCCTCACAGCTATGTATCCTATTCTTCCGAAATTAACATCCTTAAACTTGAGTTATGCAGCAGGCATTCCAGGCAGTGATTTGATAAAATTGATTCGTCACTGCAAGAAACTTCAGCGCTTATGGATAATGGATTCCATTGGAGATAAAGGGCTAGGTGTTGTAGCTAACACGTGTAAGGAATTGCAAGAATTGAGGGTTTTTCCTTCTGACAACATTGGTCAGCATGCGGCTGTCACAGAGAAGGGATTGGTTGCGATATCTATGGGCTGCCCGAAACTTCACTCATTGCTCTACTTCTGCCACCAGATGACAAATGCTGCCCTAATAACTGTGGCCAAGAACTGCCCAAATTTTATCCGCTTTAGGTTGGCTATCCTTGACGCAACAAAACCCGACCCCGACACAAATCAGCCACTGGATGAAGGTTTTGGGGCGATTGTGCAATCTTGCAGGCGTCTTAGGCGGCTTTCCCTCTCTGGCCAGCTGACTGATAAGGTATTCCTCTACATCGGAATGTATGCTGAGCAGCTTGAGATGTTGTCCATTGCCTTTGCCGGGGAGAGTGACAAGGGGATGCTCTATGTTCTGAATGGATGCAAGAAGCTCCGCAAGCTTGAGATCAGGGACTGCCCTTTCGGCAACACAGCACTTCTGACAGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCGTGCGAAGTAACCGTCGGAGCATGCAAGGTGCTAGCAATGAAGATGCCGAGGCTAAATGTTGAGATCTTCAACGAGAATGAGCCAGCCGACTGCGAGCCGGATGATGTGCAGAAGGTGGAGAAGATGTACTTGTACCGGACATTGGCTGGGAAGAGGAAAGATGCACCGGAATATGTATGGACCCTTTAG 1716 0.4674 MNYFPDEVIEHIFEYVGSHRDRNALSLVCRSWYRIERCTREKVFIGNCYSITPERLIQRFPSLKSLTLKGKPHFADFSLVPHGWGGFVYPWIEALAKGKVGLEELRLKRMVVSDESLELLSRAFPNFKSLVLVSCEEFTTDGLAAIAANCKWLRELDLQENEVDDHKGQWLSCFPDSCTSLVSLNFACLKGEINTGVLERLVARSPNLKSLRLNRSVPLDALQRILARAPQLVDLGVGSLVHDPAMETFAKLMTTMNKCKSITSLSGFLEVTPRCLTAMYPILPKLTSLNLSYAAGIPGSDLIKLIRHCKKLQRLWIMDSIGDKGLGVVANTCKELQELRVFPSDNIGQHAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLAILDATKPDPDTNQPLDEGFGAIVQSCRRLRRLSLSGQLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLTDVGKYETMRSLWMSSCEVTVGACKVLAMKMPRLNVEIFNENEPADCEPDDVQKVEKMYLYRTLAGKRKDAPEYVWTL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2517 571 SUPERFAMILY RNI-like 18 531 - -
Amo06g2517 571 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 2 568 - -
Amo06g2517 571 SMART LRR_CC_2 365 389 IPR006553 -
Amo06g2517 571 SMART LRR_CC_2 283 308 IPR006553 -
Amo06g2517 571 SMART LRR_CC_2 425 448 IPR006553 -
Amo06g2517 571 SMART LRR_CC_2 474 499 IPR006553 -
Amo06g2517 571 SMART LRR_CC_2 124 149 IPR006553 -
Amo06g2517 571 Pfam F-box 2 41 IPR041567 -
Amo06g2517 571 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Amo06g2517 571 Gene3D Ribonuclease Inhibitor 41 571 IPR032675 -
Amo06g2517 571 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 2 568 - -
Amo06g2517 571 SMART fbox_2 4 45 IPR001810 GO:0005515
Amo06g2517 571 Gene3D - 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2517 Amo-Chr6 88043985 88047007 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2517 - - gmx:100812516 1001.5