Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2489 ATGAGCAGCTGGAGAAGCCTTCTTCTGCGAATCGGCGACAAGAGTCCCGAATACGGTGCCGCCGGCGACTTCAAGGACCACATTGAAACATGTTTTGGCGCCATTCGCAGAGAGCTCGACCACTCCCAAACCGAGATTTTGGAGTTCCTTTTGGCATGTGCTGAGCAATTGCCTCACAAGATTCCGTTGTATGGAACCCTGATTGGCTTGATTAACCTAGAAAATGAGGACTTCGTTAAAAAACTAGTGGACAAAACTCGGACTAAATTTCAGGATGCGTTAAATTCTGGAGACTGCAATGGGGTTCGTATCCTAATGCGGCTTATGACTGTCATGATGTGCAGTAAGGTTCTTCAACTAAGCTCTTTGGTTGGCATCTTTGATACGTTTTTATCATCAGCTGCTACAATAGTTGATGAGGAAAAAGGAAATCCCTTGTGGCAGCCTTGTGCAGACTTTTATATAACTTGTATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTGTTGAGCAAGTTCCTGAAGAGATTGAGAGACTGATGGTTAGTGTTGAAGCTTATTTGAGCATCAGAAGGCGTGACTCTGACACTGGTTTATTCTTTTTTGAAAAAGATGATGCAAACGAGAGAGGTTCCGGTGATAAGGATTTTGTAGAAGACTTATATGACAGAATACAAGCTTTATCTAGTAATGGATGGAAAGTTGAAAGTGTTCCAAGACCACATCTATCATTTGAAGCTCAGCTTGTTGCTGGGAAGTCCCATGAATTTGGGACAGTGAGCTGCCTTAACATACCAAGCCCACCTTCAGTACCTTCTGGCATATCTAATGGTAAACAAAAGCATGAAGCAGAGTTAAAATATCCACAAAGGATACACCGGCTTAACATATTTCCCCCCAGTAAAACTGAGGATCTGCAGCCTATTGATCGATTTGTTATGGAAGAATATCTCCTGGATGTGCTTCTTCGAAAGGAATGTGCTTCTTTTATGGTTGGCTTGCCAGTGCCCTTCAGATATGAGTACCTCATGGCTGAGACAATATTCTCTCAGGTATTTGCACCTACCTACCTCGATGCTTTTGATTGGACCCTGTTGCTGATGCTACCTCAACCACCTTTCAAGCCAATATACTACACACTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCATTTCCTGCAGTTGTTGCTGGAGCAGTTCGTGCTCTCTTTGAGAAGATTGCTGATTTGGATATGGAGTGTCGAACACGTCTCATCCTTTGGTTTTCACATCATTTGTCGAACTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCTTAGACCTCCCAAAGTGGGCCCCGCAACGTGTGTTTGTTCAGGAGGTTTTGGAGCGAGAAGTTCGCTTATCTTACTGGGACAAAGTTAAGCAGAGCGTTGAAAATGCAGCTGGTTTAGAAGAATTACTTCCTCCAAAAGGTGGACCAAACTTAACTTTGGGGGCAGACGGTACAGAGAACAATGAAAATGTGCTCTCTGGAGAGCTTAACAACATGGTTAAAGGAAAGGCACCTGTTCGTGAAATAATCTCGTGGATTGATGAAAGCGTACTTCCAAATAATGGTCTAGAAGTTACACTAAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCTAAAAGTTTCACACATTTGATAACCGTCTTAGAGAGATATGGTCAAGTTTTTGCAAAACTATGTCCTGACCAGGATAAGCAAGTCATGCTGATTGCTGAAGTGGGTTCATTTTGGAAGAGTAACACCCAAATGACAGCAATAGCAATTGACAGGATGATGGGTTATCGACTTGTATCAAATTTGGCCATCGTGAGATGGGTTTTCTCCTTAGAAAATATTGAGCAATTTCATACATCAGATCGTCCATGGGAGGTTCTTCGAAATGCAGTAAGCAAGACATATAATCGTATTTCTGATTTAAGGAAAGAGATATTATCTCTTAAAAGGAATATTTTATCAGCTGAAGAAGCTGCAAAGCAAGCAAAAGAAGAGTTAGATGCTGCAGAGTCGAAACTGACACTTGTAGATGGTGAACCAGTTCTTGGTGAAAATCCTGCTAGGTTGAATAGATTGAAGTCGCAAGCTGCAAAAGCAAAGGAGGAGGTGGTTTCTCTTCAAGAATCTTTTGAAGCTAAGGAAGCTCTTCTTGTCCGAGCAATTGAAGAAAATGAGGCATTATTTCTAATGTTGTACAAAAGCTTCTCAAATGTGTTGGTGGAGCGCCTTCCTGAAGGATCTAAAGCTAGATCACTGCACGAATTGAAGGCTGCAGAAGTTGATGTGATGGCAGTGGATCCTCAAGAACCATCAACAATGGAACTAGATAATGAGAATCAACAACCCCAAAACAGTCAGTCAAATGGCGGGAAGAAAAGTGGTGCTTACAATGTAGGCGAAAAGGAGCAATGGTGTATCACCACTTTGGGTTATGTGAAGGCCTTTTCCAGGCAGTATGCGGCTGAGATATGGCCTCATATTGAGAAGCTGGATGCTGAGGTATTGACAGAAGAAGCACCTCCTCTTTTTCGATCGGCTGTTTATTCTGGTCTTAGAAGACCAATTAACGAGGCTTGA 2619 0.425 MSSWRSLLLRIGDKSPEYGAAGDFKDHIETCFGAIRRELDHSQTEILEFLLACAEQLPHKIPLYGTLIGLINLENEDFVKKLVDKTRTKFQDALNSGDCNGVRILMRLMTVMMCSKVLQLSSLVGIFDTFLSSAATIVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQVPEEIERLMVSVEAYLSIRRRDSDTGLFFFEKDDANERGSGDKDFVEDLYDRIQALSSNGWKVESVPRPHLSFEAQLVAGKSHEFGTVSCLNIPSPPSVPSGISNGKQKHEAELKYPQRIHRLNIFPPSKTEDLQPIDRFVMEEYLLDVLLRKECASFMVGLPVPFRYEYLMAETIFSQVFAPTYLDAFDWTLLLMLPQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSVENAAGLEELLPPKGGPNLTLGADGTENNENVLSGELNNMVKGKAPVREIISWIDESVLPNNGLEVTLRVVVQTLLNIGSKSFTHLITVLERYGQVFAKLCPDQDKQVMLIAEVGSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSLENIEQFHTSDRPWEVLRNAVSKTYNRISDLRKEILSLKRNILSAEEAAKQAKEELDAAESKLTLVDGEPVLGENPARLNRLKSQAAKAKEEVVSLQESFEAKEALLVRAIEENEALFLMLYKSFSNVLVERLPEGSKARSLHELKAAEVDVMAVDPQEPSTMELDNENQQPQNSQSNGGKKSGAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHIEKLDAEVLTEEAPPLFRSAVYSGLRRPINEA* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2489 872 MobiDBLite consensus disorder prediction 785 809 - -
Amo06g2489 872 Gene3D - 298 490 - -
Amo06g2489 872 Coils Coil 645 693 - -
Amo06g2489 872 Gene3D - 3 269 - -
Amo06g2489 872 Pfam MIF4G like 509 835 IPR015174 GO:0016070
Amo06g2489 872 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Amo06g2489 872 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Amo06g2489 872 Coils Coil 703 730 - -
Amo06g2489 872 SUPERFAMILY ARM repeat 294 487 IPR016024 -
Amo06g2489 872 Pfam MIF4G like 366 476 IPR015172 GO:0016070
Amo06g2489 872 MobiDBLite consensus disorder prediction 786 807 - -
Amo06g2489 872 Gene3D - 501 862 - -
Amo06g2489 872 SUPERFAMILY ARM repeat 487 858 IPR016024 -
Amo06g2489 872 Pfam MIF4G domain 22 192 IPR003890 GO:0003723|GO:0005515
Amo06g2489 872 PANTHER CAP BINDING PROTEIN 2 869 IPR027159 GO:0000339|GO:0005846|GO:0006406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2489 K12882 - gmx:100811738 1472.6