Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2480 ATGCAGAGTGCTTTAACCTTTGCTTCCCCTGTTGTTATGCCATTGGCACCTTCAAAGAGTGTCTCCCAAGTAACCACCTTCCCTACCAAATTAGCTTCCTCACTTTCTTCACCTCATAGGGTTGCAGCCAAAGTTGCAACCGTTAACTATGACACTTCAACAGTAGATTACAGCTCTATGTTCTCTGTGTTTCCGGCGGAAGCTTGCGAAACCGTCGGAGGGGACGCATGTTTGGCAGAGATGTATCCTGAAGCGAGGGTTCAGCCGGAGGCTCGGAACGACAAACCTCAAGTTGCTTCAGAAAGTGTTGATAGAGAGTATCTTGAATACAATGATCCCAAGACGGTCTTTCTTGGAGAAGCTTGTGATGAACTCGGAGGAATGTTCTGTGAGCACGAGTATCAGAAGGGTGTCTACTAG 420 0.4738 MQSALTFASPVVMPLAPSKSVSQVTTFPTKLASSLSSPHRVAAKVATVNYDTSTVDYSSMFSVFPAEACETVGGDACLAEMYPEARVQPEARNDKPQVASESVDREYLEYNDPKTVFLGEACDELGGMFCEHEYQKGVY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2480 139 Pfam Light regulated protein Lir1 1 131 IPR009856 GO:0009507
Amo06g2480 139 PANTHER LIGHT-REGULATED PROTEIN 1 139 - -
Amo06g2480 139 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 139 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2480 Amo-Chr6 87179025 87180843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2480 - - gmx:100305960 202.216