Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2455 ATGGAAGACAGTTTCAGAGTCCGCGTCGACAAAGCCTTCGGTTCTCTTCCTCTTTCTTCAACCTCCCCTTCTTCTCTCTCCTCTCTCTGGTCCCTCGCCGACGACGAAATCAACTCCACACCATCCAACCAATCCGAACCTAAACCCGACCCTAAACCCTCCGCATGGTCCACCGCCGCAACCTCCTCCTCTTTTTCTTCCAGCTTCCGGGTTCAGCTAGAGAATGACCTCGATGATCTCAACGACGAAGACGACGATAACGAAGATGGTGACGCGGGGTTTCGTCGTACTCAGCTCAAACCCGACGATTACGACGATGAACAGTGGCAAATTAGGTCTGGTATTGGCCTCGATTGCACCCTTGATCACGAGGAAGAGGAAGATAAATATGATAAACAAGCAATTGGGAAAGAGAACCAGGGGGATCGAGTTTATATGAAGGATATAGCTGATGATGGTGTTGAGATTGATTCTTGCTACGCTCTTCCATCTAGGTTCGGAGAACACGTGAGGGATCCACGTGCCAACCACTTGGCTGCAAAAATGAGGCTGAAGCAGGATGATGAAGCAGCTAAAAAAATTGATGCTTTGCACGTCTCTGATAAATCAGCACCCGAGGCTGGCACCGGCGGTGGCGACGGTGGTGTCGATAGTATTAATCTCAAGCCCATTTTGAAGAGTAAGGATAAGCCTCCAGAACAGAAGTCCCAGAAACGTGTTCGGTTTGATCCTGATTGCGATGTTAGATATGGTGAGGACGATGAATATGAAGGAACGAGGGATGTTCGAATGAAGACTTCTTTGATTGAAGAAGAAGCAGTTTTCGAGCAGCCATCAAAAGCACAAGAATTTGCTTCAGCTGTTCCAGATTACATTCGAAATCCGTCGAGATACACGCGATATACTTTCGATGATTCCAACGATGACATTGATGATAAATCGAATAAGGCAGCGTATATGAGTTTCCTTTCGCAGTTAAAGGCATCAAATGCTGCTGCTGGAACCGGATCACAGGGAGAGGATGCCGAGGATGATCTTCCATCGGTTACATTCATATCAAGGAAGAAATCCGGTGATGTTTCAATGGTAGAGCATAAGAATGTTTCAAAGCAAAAAGAGGATGTTGGGAAGGAGAATAAAAGAGCTTTCAGTGTTAGTATAGCAGCTGGTGAGAATGAGGATACTGATGTTTGTGCAATGGAGGAGGATATGCCAGGAGAAGCCATTGAAGATGTTAAGAAGAGCTCTCAAAGGTTGAACCGCAAGTACAGGAAGAAAACACAAGACGAGCTGGATGAGCCTGATGTCTAA 1311 0.4638 MEDSFRVRVDKAFGSLPLSSTSPSSLSSLWSLADDEINSTPSNQSEPKPDPKPSAWSTAATSSSFSSSFRVQLENDLDDLNDEDDDNEDGDAGFRRTQLKPDDYDDEQWQIRSGIGLDCTLDHEEEEDKYDKQAIGKENQGDRVYMKDIADDGVEIDSCYALPSRFGEHVRDPRANHLAAKMRLKQDDEAAKKIDALHVSDKSAPEAGTGGGDGGVDSINLKPILKSKDKPPEQKSQKRVRFDPDCDVRYGEDDEYEGTRDVRMKTSLIEEEAVFEQPSKAQEFASAVPDYIRNPSRYTRYTFDDSNDDIDDKSNKAAYMSFLSQLKASNAAAGTGSQGEDAEDDLPSVTFISRKKSGDVSMVEHKNVSKQKEDVGKENKRAFSVSIAAGENEDTDVCAMEEDMPGEAIEDVKKSSQRLNRKYRKKTQDELDEPDV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2455 436 MobiDBLite consensus disorder prediction 35 74 - -
Amo06g2455 436 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 281 332 IPR029338 -
Amo06g2455 436 Coils Coil 409 429 - -
Amo06g2455 436 MobiDBLite consensus disorder prediction 193 259 - -
Amo06g2455 436 MobiDBLite consensus disorder prediction 406 436 - -
Amo06g2455 436 MobiDBLite consensus disorder prediction 223 259 - -
Amo06g2455 436 MobiDBLite consensus disorder prediction 35 100 - -
Amo06g2455 436 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 429 IPR029338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2455 Amo-Chr6 86735195 86737459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2455 - - gmx:100819106 481.87