Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2441 ATGTTGAGGGTTGCAGCAAAGAGGTTCTCTTCTCTGTCTTCGTCTTCATGGAGAGCTAACCATGCTGCCTCTGCTTTCGTCTCTCGGAACCCCATCGCCCCTCACTATGACTCCCACGATCGCGGATCCGCTCCCCAACCCCAATTCTGTCTCCCATTCCGAGGTTTTGCTACTGGATTGCCAGTCCATACAAAAGAAAACAGCATTATTCCTGAAATTCCAGCAACTGTAGCTGCTGTCAAAAACCCTTCCTCTAAGATTGTATATGATGAACACAATCATGAACGATATCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCCTACTTTGTCCTAACAGGTGGTAGATTTGTCTATGCCTCTCTTGTCCGTCTCCTTATCCTCAAGTTTGTGCTCAGRATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCAGGCACCACTGTGACTGTTAAGTGGCGTGGAAAGCCTGTGTTCATTAGGCGCAGAACAGAAGATGATATTAAGCTGGCAAACAGTGTTGACGTTGGATCTCTTCGCGATCCCCAGCAGGATGCGGAGAGAGTCAAGAACCCCGAGTGGCTCATTGTGATTGGGGTTTGCACACATTTGGGTTGTATCCCCTTGCCAAATGCTGGTGACTTTGGRGGTTGGTTTTGCCCTTGCCATGGCTCACATTATGATATTTCTGGCAGAATTAGYAAGGGACCAGCGCCATACAATCTGGAGGTACCAACTTATACCTTCTTGGAAGAGAACAAGTTGCTAATTGGTTGA 807 0.4783 MLRVAAKRFSSLSSSSWRANHAASAFVSRNPIAPHYDSHDRGSAPQPQFCLPFRGFATGLPVHTKENSIIPEIPATVAAVKNPSSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLRMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRISKGPAPYNLEVPTYTFLEENKLLIG* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2441 268 SUPERFAMILY ISP transmembrane anchor 85 141 - -
Amo06g2441 268 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 118 268 IPR006317 GO:0008121
Amo06g2441 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 IPR014349 GO:0051537
Amo06g2441 268 PRINTS Rieske 2Fe-2S subunit signature 206 217 IPR005805 GO:0016020|GO:0051537
Amo06g2441 268 PRINTS Rieske 2Fe-2S subunit signature 240 252 IPR005805 GO:0016020|GO:0051537
Amo06g2441 268 PRINTS Rieske 2Fe-2S subunit signature 228 240 IPR005805 GO:0016020|GO:0051537
Amo06g2441 268 CDD Rieske_cytochrome_bc1 145 268 - -
Amo06g2441 268 Gene3D - 137 268 IPR036922 GO:0051537
Amo06g2441 268 SUPERFAMILY ISP domain 133 267 IPR036922 GO:0051537
Amo06g2441 268 Pfam Ubiquinol cytochrome reductase transmembrane region 90 139 IPR004192 GO:0008121
Amo06g2441 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 - -
Amo06g2441 268 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 178 266 IPR017941 GO:0051537
Amo06g2441 268 Pfam Rieske [2Fe-2S] domain 151 254 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2441 Amo-Chr6 86193077 86196763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2441 K00411 - gmx:100806917 453.366