Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2363 ATGGACAACAGAAACGTCGTCGTCTGCGACAACGGAACTGGGTATGTGAAGTGCGGTTTCGCTGGGGAGAATTTCCCCACGTCTGTTTTCCCTTGCGTGGTGGGAAGGCCAATGCTTCGGTACGAAGAATCGCTCACTGAGCAATCGCTAAAGGGTTTGAATTTGTGTGTGGTTTTAGGATATTGTTGTTGGAGAAGGGTGGCAAACTTGCGGCATCAGCTTGATATATCTTACCCAGTTAACAATGGCATCGTGCAAAACTGGGATGATATGTGTCATGTTTGGGATCATGCATTTTACAATGAATTAAAGATTAACCCGCCTGACTGTAAAATTCTACTCACAGATCCACCGCTTAATCCCTCAAAGAATCGTGAAAAAATGGTTTTACAATTATGCTGGAGCTATATCTCAATTCAAGCTGTTCTGACATTATATGCTCAAGGTTTGTTGACTGGATTAGTTATTGACTCTGGTGATGGTGTCACTCATGTGGTTCCAGTTGTTGATGGCTATTCATTCCCTCATCTAACAAAGCGGATGAATGTAGCTGGTCGACACATAACATCCTATCTTGTTGATTTGCTTTCAAGAAGGGGGTATGCACTGAATAGGACTGCTGACTTTGAGACTGTTAGGGAAATCAAGGAGAAACTATGCTATATAAGTTATGATTACAAGAGGGAATATCAATTGGGGCTTGAGACCACTATCCTTGTCAAGAACTATACGCTTCCAGACGGGCGGGTCATTAAAGTGGGCACTGAAAGGTTCCAGGCTCCTGAGGCTCTTTTCACTCCGGAACTTATAGATGTTGAAGGTGATGGAATGGCTGACATGGTCTTTAGATGCATTCAGGAAATGGATATTGACAATCGGATGATGCTTTACCAACACATAGTTTTAAGTGGAGGGAGCACCATGTATCCTGGATTACCAAGCCGATTGGAAAAGGAAATACTTGATCGTTATCTTGATGTTGTTCTGAAGGGTAACAAAGATGGATTGAAGAAATTGCGATTAAGAATTGAGGATCCACCGCGTAGAAAGCACATGGTGTACCTTGGAGGTGCTGTACTAGCAGGGATAATGAAGGATTCCAACGATTTTTGGATCGAAAGGGAACATTATCTAGAAGAAGGAGTTGCTTGTCTAAGTAGGTTAGGCCATTAA 1173 0.4263 MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLTEQSLKGLNLCVVLGYCCWRRVANLRHQLDISYPVNNGIVQNWDDMCHVWDHAFYNELKINPPDCKILLTDPPLNPSKNREKMVLQLCWSYISIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYALNRTADFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDSNDFWIEREHYLEEGVACLSRLGH* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2363 390 PANTHER ACTIN 1 388 IPR004000 -
Amo06g2363 390 SUPERFAMILY Actin-like ATPase domain 149 387 IPR043129 -
Amo06g2363 390 SMART actin_3 4 389 IPR004000 -
Amo06g2363 390 Gene3D Actin; Chain A, domain 4 183 274 - -
Amo06g2363 390 PRINTS Actin signature 25 34 IPR004000 -
Amo06g2363 390 PRINTS Actin signature 239 255 IPR004000 -
Amo06g2363 390 PRINTS Actin signature 143 162 IPR004000 -
Amo06g2363 390 SUPERFAMILY Actin-like ATPase domain 2 156 IPR043129 -
Amo06g2363 390 Gene3D - 7 382 - -
Amo06g2363 390 Gene3D - 141 352 - -
Amo06g2363 390 PANTHER ACTIN-RELATED PROTEIN 2 1 388 - -
Amo06g2363 390 CDD NBD_sugar-kinase_HSP70_actin 77 192 - -
Amo06g2363 390 Pfam Actin 2 385 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2363 Amo-Chr6 83767374 83778487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2363 7 387 Miscellaneous Gene Families AT3G53750 42.268 1.35e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2363 K17260 - gmx:100803980 716.457