Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2253 ATGGCTTCTTTTCTTTCCTTATCTCTTCCGAAACTAAACTTGATAAAAGCCTCATCAACATCTGCTACTACTACTTCTACTAGTGTCTCCACTCCTGAGGCACTCAACGAGAAATTCGGCCGAAAAGGCATCAAGTTCTGTGAAGCTGACAGTGTCCCGGTTGTGGAGCTTTCGGTCCGAAATGGCAGCTCATTGAGCCTAAGGATACCTGATGCTCATGTGACATCTTACAGGCCACATGTTTATTGGAAAGATGATGGTTTTGAGGAGGTGCTTTATACAATTCCGGCTGCCGAAGCCGGCCTATACAAGGCCAAGGGTGGGATTGGTTTGATCTTGAATGAAACAGTGCAACCTGGAGGCAGACAGTTACTCCCTTCAACTTTAGAGTGGACTGTAAATGATGCTGACTTCGACGCCATTGATGCTGTCCAGGTTGAATTGAGCTGCACTAGTAGATTTTTGGACATCACATACGTTGTGAGCCTTTATCCAGTGAGCATGGCCACAGCAGTTATAGTGAAGAACAAAGCTCCTAAGGCTGTTACTCTAAACAATGCCATACTCAGCCACTTTAGATTCAAGACAAGAAATGGTGCAGCAATTCAAGGCCTTAGAGCCTGCTCATACTGTTTGCACCCTCCTCCGTCTTCGCCTTTTCAAATCCTGACTCCGGCTGATGCCACGAAATCCGAGCCTCCCGGATGGCTTTCCTTCGGCGCTGAGCCGGAACCAAAGCCGGGGACATGGGGTCAGCAAGACCTGACTTTTACACTTCTTGAGAATAAGATGAGTAGAGTCTATGCAGCACCTCCAAGTGAAAGATCAAAGCCATTTTACAATACTCCACCTTCCAAGTATGAAACCATTGATCAGGGACGAGAGCTTTGCTTCAGGGTAATAAGAATGGGATTTGAGGATATTTATGTATCAAGCCCTGGTTCATTGTCAGAGAAATATGGAAAAGACTACTTTATATGCACTGGCCCTGCTTCAATACTGGAGCCTGTGACTGTGAACCCTGGAGAAGAGTGGAGAGGAGCACAAGTTATTGAGCATGACAATCTCACTTAA 1074 0.46 MASFLSLSLPKLNLIKASSTSATTTSTSVSTPEALNEKFGRKGIKFCEADSVPVVELSVRNGSSLSLRIPDAHVTSYRPHVYWKDDGFEEVLYTIPAAEAGLYKAKGGIGLILNETVQPGGRQLLPSTLEWTVNDADFDAIDAVQVELSCTSRFLDITYVVSLYPVSMATAVIVKNKAPKAVTLNNAILSHFRFKTRNGAAIQGLRACSYCLHPPPSSPFQILTPADATKSEPPGWLSFGAEPEPKPGTWGQQDLTFTLLENKMSRVYAAPPSERSKPFYNTPPSKYETIDQGRELCFRVIRMGFEDIYVSSPGSLSEKYGKDYFICTGPASILEPVTVNPGEEWRGAQVIEHDNLT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2253 357 Gene3D - 52 357 IPR014718 GO:0030246
Amo06g2253 357 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 2, CHLOROPLASTIC 17 356 - -
Amo06g2253 357 SUPERFAMILY Galactose mutarotase-like 45 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Amo06g2253 357 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 17 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2253 - - gmx:100788455 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2253 06 80139991 80142239 Amo20g3623 20 146775187 146777555 PCT
Amo20g3623 20 146775187 146777555 Amo06g2253 06 80139991 80142239 PCT