Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2248 ATGAGACCCCCGAGAGGTGGCGGAAGAGGAGGCGGTTTTCGAGGTGGCCGTGACGGAGGAGGACGAGGCAGAGGCGGAGGCGGAAGAGGTTTTGGCGGCCGTGGTGGCGGCGGGTTTCGTGACGAAGGTCCTCCCACTGAAGTCGTAGAGGTTTCAACATTTATGCATGCTTGTGAGGGTGATGCAGTGACAAAACTAACGAACGAGAAGATTCCCTTTTTTAATGCTCCTATATACTTGCAAAACATGACTCAGATTGGGAAAGTTGATGAAATATTTGGCCCCATTAATGAATCTTACTTTTCAATCAAAATGATGGAAGGGATTGTTGCTACTTCGTATGCAGCTGGTGACAAGTTTTACATTGACCCGAGGAAACTTTTGCCTCTTGCAAGATTTCTCCCACAGCCAAAGGGGCAATCACAGGGTGGTAGAGGTGGAGGTGGAGGAGGTCGTGGTGGAGGCAGAGGCGGTGGCTTTCGTGGAGGTGGTGGCTTTCGTGGAAGGGGTGGCCCAAGGGGTGGTGGTAGAGGTGGACCTCCTAGGGGAAGAGGTGGTTTCAGGGGAAGGGGAGGTAGATTTTAG 585 0.5231 MRPPRGGGRGGGFRGGRDGGGRGRGGGGRGFGGRGGGGFRDEGPPTEVVEVSTFMHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIVATSYAAGDKFYIDPRKLLPLARFLPQPKGQSQGGRGGGGGGRGGGRGGGFRGGGGFRGRGGPRGGGRGGPPRGRGGFRGRGGRF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2248 194 Gene3D Probable tRNA pseudouridine synthase domain 44 135 IPR038664 -
Amo06g2248 194 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 191 - -
Amo06g2248 194 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 191 - -
Amo06g2248 194 MobiDBLite consensus disorder prediction 135 194 - -
Amo06g2248 194 SUPERFAMILY Translation proteins 49 123 IPR009000 -
Amo06g2248 194 Pfam Gar1/Naf1 RNA binding region 48 134 IPR007504 GO:0001522|GO:0042254
Amo06g2248 194 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2248 Amo-Chr6 80039007 80041052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2248 K11128 - gmx:100788981 211.075