Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2210 ATGGCTAAAATCCGCATCGCCATCATCTTATTGGGGCTCTGCCTAGTATGCAATTTGGCAGGTTTGGCAGAGGCAGAGTACATGAAGTACAAGGACCCCAAACTGTCAATCGATGCAAGGGTTGAGGATCTTATTAGCCGGATGACTCTTGAGGAGAAAATTGGCCAGATGTTGCAAGTCGAACGCAAGTATGTGTCTGCTGATGACATCAAGAAGTATTCTATTGGGAGTGTCATGAGCGAGGCAGGGAGTATTCCAGGTCCATCTCGATTGGCTTCTGCGCAAACCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCTGTATCAAGCCGGCTTGGAATTCCAATGTTTTATGGCATTGATGCCGTTCATGGCCACAGCACTGTTTATAAAGCAACTKTTTTCCCTCACAATATTGGCCTTGGAGCTACCAGAGATCCTGAACTTATTAAGAGAATTGGAGCTGCCACTGCCCTTGAAGTTAGAGCAACAGGTATTCAATATACCTATGCACCTTGTATAGCAGTATGTAGAGATCCAAGATGGGGTCGGTGTTACGAAAGCTACGGCGAAGATCCTGCACTAGTTCAGTCAATGACTGAAATAATACCAGGATTGCAAGGAGACATTCCTGCTGATTTACCAAACGGTGTCCCTTTTATGGCTGGAAATGAAAAGGTCATAGGTTCTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGTACAACACTGTCATAGATAGAGAGGGMTTGYTSAGAATTCACATGCCGGGTTATTTTGCYGCAATTAGCAAGGGAGTTGCAACGATTATGGTCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTAATCGTGAACTTATTACCGGATTCCTCAAGAATRCCCTCCATTTCAAGGGCGTGGTTATTTCAGATTTTGAGGGTATTGATAGGATCACCACTCCACCTCATGCAAATTTCACATATTCAGTTGAAGCTGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCTCAATTCTACAAAGAATTCATAGATGATCTAACCAAATTGGTGACAAAGAAGTTCATTCCTATGAGTCGAATCGATGATGCAGCAAAGAGAATTTTGTGGGTTAAGTTCATGATGGGCCTATTTGAGAACCCTTTTGCTGATTACAGTTTGGTTAGATATCTGGGAATACAGGAGCATAGAGAATTGGCTAGGGAAGCTGTGAGGAAATCACTGGTCCTTCTTAAAAATGGCGAATCTGTTGAGAAGCCTCTATTGCCTCTTCGTCGGAAGGCTTCGAAAATACTTGTAGCCGGAAGCCAYGCAGATAATCTAGGATATCAGTGTGGCGGCTGGACTATTGAATGGCAAGGAATCAGTGGCAATGATATTCTCAAAGGGACTACAATTCTCAATGCTATAAGAAACACTGTTGATCCAGAGACCATAGTGACCTACAAGGAGAATCCTGATGCCGAATWTGTCRAGTCCAATGGATTTTCTTATGCCATAGTTGTAGTAGGAGAGCATCCCTATGCTGAAATGCATGGTGATAACAAGAACTTGACCATCCCGGACCCTGGCCCCGAGACCATAACAAATGTATGTGGAGCCATAAAATGYGTGGTGGTTGTTATTTCCGGCCGCCCTGTAGTTATTGAACCATATCTTCATATAATAGACGCKCTTGTGGCTGCTTGGCTTCCGGGAAGTGAAGGCCAGGGTGTAGCTGATGTCCTATATGGCGACTACGGTTTCACCGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAATTACCAATGAATGTTGGAGATCCTCATTATGATCCCCTTTTCCCATTTGGGTTTGGCCTTTCTACTGAACCTATTAAGGCCATTTACTCAGCATAG 1908 0.4366 MAKIRIAIILLGLCLVCNLAGLAEAEYMKYKDPKLSIDARVEDLISRMTLEEKIGQMLQVERKYVSADDIKKYSIGSVMSEAGSIPGPSRLASAQTWIDMVNEFQKGAVSSRLGIPMFYGIDAVHGHSTVYKATXFPHNIGLGATRDPELIKRIGAATALEVRATGIQYTYAPCIAVCRDPRWGRCYESYGEDPALVQSMTEIIPGLQGDIPADLPNGVPFMAGNEKVIGSAKHYVGDGGTINGIDEYNTVIDREGLXRIHMPGYFAAISKGVATIMVSYSSWNGVKMHANRELITGFLKNXLHFKGVVISDFEGIDRITTPPHANFTYSVEAGVSAGIDMFMVPQFYKEFIDDLTKLVTKKFIPMSRIDDAAKRILWVKFMMGLFENPFADYSLVRYLGIQEHRELAREAVRKSLVLLKNGESVEKPLLPLRRKASKILVAGSHADNLGYQCGGWTIEWQGISGNDILKGTTILNAIRNTVDPETIVTYKENPDAEXVXSNGFSYAIVVVGEHPYAEMHGDNKNLTIPDPGPETITNVCGAIKCVVVVISGRPVVIEPYLHIIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTEPIKAIYSA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2210 635 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 416 625 IPR036881 GO:0004553|GO:0005975
Amo06g2210 635 Gene3D - 23 400 IPR036962 GO:0004553|GO:0005975
Amo06g2210 635 PRINTS Glycosyl hydrolase family 3 signature 228 244 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 PRINTS Glycosyl hydrolase family 3 signature 112 128 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 PRINTS Glycosyl hydrolase family 3 signature 298 316 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 PRINTS Glycosyl hydrolase family 3 signature 182 198 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 PRINTS Glycosyl hydrolase family 3 signature 136 155 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 SUPERFAMILY (Trans)glycosidases 27 415 IPR017853 -
Amo06g2210 635 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 7 634 - -
Amo06g2210 635 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 7 634 - -
Amo06g2210 635 Pfam Glycosyl hydrolase family 3 N terminal domain 49 377 IPR001764 GO:0004553|GO:0005975
Amo06g2210 635 Pfam Glycosyl hydrolase family 3 C-terminal domain 416 625 IPR002772 GO:0004553|GO:0005975
Amo06g2210 635 Gene3D - 401 627 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2210 Amo-Chr6 78907578 78912331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2210 2 630 Glycoside Hydrolase AT5G20950 68.839 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2210 K05349 - gmx:100779642 1085.09