Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2187 ATGGAATCCAAGCTTACACATACAACTAATCGGGTTTATGAGGATTTTGATCCTGTATGCAAATTGCGTATAGATGAGGCCCGTGACACCATTGAACTTCATCTTCCAGGTTTTAAAAGAGAACAAATAAGAATTCAGATAAACCARCTTCGAATGATGATTATAAGTGGAGAGCGTCCCTTATTGGATGGAACAAAATGGAAGCGTTTCAATAAAGAGATTAAACTCCCACCCTTTTGCAACGAAGATGCCATTCATGGCAGTTTCATGCAAAACATTCTCACCGTAGTAATGCCAAAGAAAATCCCTCAATCTTATCGAGAAGAAGAAGAAGAAGAACAAGAAGAATTTGAACCCGCCATGAAGAAAAAGAAAGACAAAGGTAAAGAGAAAGTAACCTTTGAAGAAGAAGATAAAGTTAGTGAAGCCACATCCAAAGCAGAAGATAGTTATGATATTAATAATTTTAGTGACACAAAAAAAGGGTACTATAATAATAAAGATGATGTTATTGATCAGGAGTTACCACCTGAAACGACCAGAGAGGTTGCACTCAAATTCATGCTTGTTATCATTGTCATATTGGTTGTAGCAAGTTACCTTGCGGATATGAGCAAAAGTTTCATGGCTCATGCTCATTCTTATTTTCATAATTAG 657 0.3607 MESKLTHTTNRVYEDFDPVCKLRIDEARDTIELHLPGFKREQIRIQINQLRMMIISGERPLLDGTKWKRFNKEIKLPPFCNEDAIHGSFMQNILTVVMPKKIPQSYREEEEEEQEEFEPAMKKKKDKGKEKVTFEEEDKVSEATSKAEDSYDINNFSDTKKGYYNNKDDVIDQELPPETTREVALKFMLVIIVILVVASYLADMSKSFMAHAHSYFHN* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2187 218 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 10 115 IPR002068 -
Amo06g2187 218 MobiDBLite consensus disorder prediction 105 130 - -
Amo06g2187 218 Gene3D - 1 103 IPR008978 -
Amo06g2187 218 SUPERFAMILY HSP20-like chaperones 11 104 IPR008978 -
Amo06g2187 218 CDD ACD_sHsps-like 30 100 - -
Amo06g2187 218 Pfam Hsp20/alpha crystallin family 30 108 IPR002068 -
Amo06g2187 218 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 5 215 - -
Amo06g2187 218 PANTHER HEAT SHOCK PROTEIN 26 5 215 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2187 Amo-Chr6 78436225 78441294 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2187 - - ahf:112696952 421.009