Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2184 ATGGCTGCTGCTTTTGTTGGTCGAGTAGCATTCTTTGCCATTTCCATGGTTTTGCTTTCATCATTTGCTACTGCAACTGACTTCGTTGTTGGTGATAATGACGGATGGAAACTTGATTATAATTACACAAAATGGGCCCAAGATAAAGTTTTCCATGTTGGTGATGTCCTTGTGTTCAAATACAACAATGACAGCCACAATGTGCTGAAAGTGAATGCAACATCTTTCAAGGACTGTGTCACCTCTGATCCACTGGAAACATTCCGAAGCGGCCATGATTGGATCTCCCTTCAAAGCCCGGGAAAGAAGTGGTACATCTGCGGCATTGCAGGCCATTGTGCTGACCACCAAATGAAGCTTGTCATCAACGTCCTCGCCGACGGTCCCGCCCCCGCTCCTACTTCTTCTTCTCACTCTCTTGTCTCCTCTCTTGCCGTGATGGTCGCAGCGGCCATGATTGGCGTTGCGGCCATCTTCGCCTAG 483 0.4824 MAAAFVGRVAFFAISMVLLSSFATATDFVVGDNDGWKLDYNYTKWAQDKVFHVGDVLVFKYNNDSHNVLKVNATSFKDCVTSDPLETFRSGHDWISLQSPGKKWYICGIAGHCADHQMKLVINVLADGPAPAPTSSSHSLVSSLAVMVAAAMIGVAAIFA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2184 160 Pfam Plastocyanin-like domain 38 115 IPR003245 GO:0009055
Amo06g2184 160 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 7 155 - -
Amo06g2184 160 ProSiteProfiles Phytocyanin domain profile. 26 126 IPR003245 GO:0009055
Amo06g2184 160 PANTHER BLUE COPPER PROTEIN 7 155 IPR039391 GO:0009055
Amo06g2184 160 CDD Phytocyanin 26 124 - -
Amo06g2184 160 Gene3D - 24 128 IPR008972 -
Amo06g2184 160 SUPERFAMILY Cupredoxins 25 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2184 Amo-Chr6 78414027 78415676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2184 4 133 Miscellaneous Gene Families AT2G31050 41.176 7.66e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2184 - - gmx:100806565 170.244