Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2150 ATGAAGGTGGTGGCGCTCGTTAGTGGCGGCAAAGACAGCTGCTATGCCATGATGAAGTCCATTCACTATGGCCACCAGATAGTTGCGTTGGCGAACTTGTTACCTGCTGATGATGACGTCGACGAGCTTGATAGCTACATGTACCAAACCGTTGGTCATCAAATTATTGTTAGCTACGCGGAATGCATGGGGTTGCCATTGTTCAGGAGGCGAATTCGAGGATCAACAAGACATCAAGAGCTTGGTTACAGAACAACCCAGGGTGATGAAGTTGAAGATATGTTTATTTTACTTCGTGAAGTGAAAAGYCAGATACCTGAAGTTACTGCAGTGTCTTCTGGGGCCATTGCATCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGYCCTTGTTTCTCTGGCATACTTATGGAAACAAGATCAATCATTGCTCCTCCAAGAAATGATTGCAAATGGAATTTTGGCTGTGACTGTAAAGGTAGCCGCCATGGGTTTGGTGCCTGGAAAGCACTTGGGTAAAGAAATAGCCTTCTTAAATGCTTATTTGCACAAATTAAAAGAGTTATATGGAATTAATGTTTGTGGTGAAGGAGGGGAATATGAAACGTTAACTCTTGATTGCCCTCTCTTCATTAATGCTCGAATTGTGCTCGATGAATACCAAGTTGTGAGGCACTCTTCAGATTCCATAGCTCCTGTTGGAATCCTTCATCCCTTGAAATTTCATTTGGAAAAGAAGGTAGATATTCAATCTTTAACATCACCAGACAACATAAGTGAAACTTATGTTCAGAAACTGGGAACTGTGTTTGAAGTGGAAGACACTTTAGAAAGATGTGAAGACACATTTAAGTCGTTGGATTGCAGTGCTGACCCAATTGATGACTTAGCACATAAATTTAACATCTCAAGAACAAATAACAAGAGAACACTCTCCTTAAGTTGCTCGTTACAAGATTCATGCAATGATTTGCGGGAAGATTTGAAGACTGTTTTGGCAAAAACTGAATCACTATTAGCTGGCTTTGGCTTTGGGTGGGAGAATGTTGTCTATATTCACCTTTACATAGATGAAATGAGTAAGTTCTCAGAGGCAAATGAGACATATGTAAAATTTATAACCCAGCAGAGGTGTCCATTTGGTGTCCCATCACGTAGTACAGTTGAAATGCCTCTAGTAGAGATGGGTTTCAGCAAAGCATATATGGAAGTTCTTGCGTCAAGTAATAAAGATAAAAAGGTTTTGCATGTACAGAGTATTTCCTCTTGGGCACCTAGTTGCATTGGGCCATACAGTCAGGCAACCTTGCACGATAATATACTTCATATGGCTGGTCAGTTGGGACTTGACCCTCCAACAATGAATCTTTGCAGTGGAGGTGCTAGTGCTGAACTGGAACTGGCTCTCAGAAACTGTGAAGCTGTGGCAAAATGCTTTCGTTGTTCAATATCCACATCAGCAATTATGTTTGTTGTTTACTGTTCTAAACGTGTCTCATCATCAGAGAGASATGATATGCAGGAGAAACTASAAACAATCCTTAGGCAGATGAGGATCTTTCAGTTACAGGAACAAAACACCTGCAAAGCATTAGATCCCGTAGTCCTTTATGTCCTTGTTCCTGATCTACCTAAAAGTGCATGTGTAGAAATAAAGCCTGTTCTTTATGTTGACGATGGCACGGAGATAGCAACTGAGACCATAACAGAAAGTTCTGGTTCCGAAGCACCCCACTACTGGGGTTTCAAGCAGGAAAATTGGCATGATTCTTGTATTCAGAAACTTGTGGTTCCAGGAAAGATTTGTGCTGTTACATTATCTATTACAAGTGAGGATGCTGCAAAGATATGTTTCCATTCTGTGTCTGCTGATTCTGTCAATGATGATCAATATCTTCAATATAAGTCGCTCATGGAGAAGTCATCAAGATTCTGCTTCTATCTTCTGGACAAAGTCATGGCCGATAATGGGTTTGGCTGGGAAGATTTAATGAGTTTGAGGATCTATATCCCTGCAAGCCTTCAAATGTCGATAGCTATGCTGCTGCCTACGTTCAACAAGGCTCTATTGGAACTTTCTGAAGCGAGTCAGAAGAAAGTTTTAAATGGCGAGGAGCCAATCTTCAACATAGTTCCTGTCATCGGTGCTGGTAGGTCTGCTTCATCCATGTCTAATATAATAACTTGCGAATTACTCGGCCAGAAATCCTGGGCATAA 2229 0.4118 MKVVALVSGGKDSCYAMMKSIHYGHQIVALANLLPADDDVDELDSYMYQTVGHQIIVSYAECMGLPLFRRRIRGSTRHQELGYRTTQGDEVEDMFILLREVKSQIPEVTAVSSGAIASDYQRLRVESVCSRLXLVSLAYLWKQDQSLLLQEMIANGILAVTVKVAAMGLVPGKHLGKEIAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFINARIVLDEYQVVRHSSDSIAPVGILHPLKFHLEKKVDIQSLTSPDNISETYVQKLGTVFEVEDTLERCEDTFKSLDCSADPIDDLAHKFNISRTNNKRTLSLSCSLQDSCNDLREDLKTVLAKTESLLAGFGFGWENVVYIHLYIDEMSKFSEANETYVKFITQQRCPFGVPSRSTVEMPLVEMGFSKAYMEVLASSNKDKKVLHVQSISSWAPSCIGPYSQATLHDNILHMAGQLGLDPPTMNLCSGGASAELELALRNCEAVAKCFRCSISTSAIMFVVYCSKRVSSSERXDMQEKLXTILRQMRIFQLQEQNTCKALDPVVLYVLVPDLPKSACVEIKPVLYVDDGTEIATETITESSGSEAPHYWGFKQENWHDSCIQKLVVPGKICAVTLSITSEDAAKICFHSVSADSVNDDQYLQYKSLMEKSSRFCFYLLDKVMADNGFGWEDLMSLRIYIPASLQMSIAMLLPTFNKALLELSEASQKKVLNGEEPIFNIVPVIGAGRSASSMSNIITCELLGQKSWA* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2150 742 Gene3D HUPs 1 157 IPR014729 -
Amo06g2150 742 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 738 IPR030662 -
Amo06g2150 742 Pfam Diphthamide synthase 1 230 IPR002761 -
Amo06g2150 742 Gene3D - 414 560 IPR035959 -
Amo06g2150 742 SUPERFAMILY YjgF-like 417 564 IPR035959 -
Amo06g2150 742 Gene3D - 306 413 IPR035959 -
Amo06g2150 742 CDD eu_AANH_C_2 435 559 - -
Amo06g2150 742 Pfam Endoribonuclease L-PSP 327 399 IPR006175 -
Amo06g2150 742 Pfam Endoribonuclease L-PSP 428 556 IPR006175 -
Amo06g2150 742 SUPERFAMILY YjgF-like 325 397 IPR035959 -
Amo06g2150 742 TIGRFAM MJ0570_dom: MJ0570-related uncharacterized domain 1 231 IPR002761 -
Amo06g2150 742 Gene3D - 160 255 - -
Amo06g2150 742 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Amo06g2150 742 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2150 Amo-Chr6 77630645 77637922 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2150 K06927 - gmx:100807009 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2835 16 125926451 125933693 Amo06g2150 06 77630645 77637922 hybridization