Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2119 ATGCTCCGCCACGTCATACTCTCCAGATTCTCCTTCCACCTCCGGCGCTTCTCCCAGTCATCCGCCGCCGCGGTACTCCACCATGAGCCACCGGAGGTGCAGCCGCTGACATACCTAGAAGGCTTTCCGAGACCGGACTCGAAATACGACGAGACGATACTCGCAATTCCTCGCGCGAATTCGGGGAAGAACATATCGGCGAAGGAACGGAAGGTTGGGCGCGTGCCTAGCATTGTGTTCGAGCAGGAGGACGGTCAGCATGGCGGCAACAAGCGCCTCATTTCCGTACGGACTAACCAGATCAGGAAGCTCGTCAACCAGCTTGGCCGCTCATTCTTTCTCTCCCGCCTCTTCGACCTCGAAGTCCGGTCGGAGTTCGAAGGCGGGGACGTTGTTGAGAAGGTTCGGGTTTTGCCCCGCAAGATTCATTTGCAGGCAGGCACAGATGCACCATTAAATGTCACTTTTCTAAGGGCTCCATCAAATGCTCTGTTGAAAGTTGAGGTCCCTCTTGTATTTCGAGGAGAAGATATATCCCCTGGACTGAAGAAAGGTGCTGCTTTGAATACCATCAAAAGGACTGTTAAGTTCCTATGTCCTGCTGACATTATCCCCCCATATATTGATCTGGATTTAAGCGAGTTGGATGTTGGCCAGAAGTTGGTTATGGGAGATCTTATTGTTCACCCTGCGCTAAAACTTATTCAGTCAAAAGATGAACCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAACTACAAAAGAAAAAGTAA 774 0.5052 MLRHVILSRFSFHLRRFSQSSAAAVLHHEPPEVQPLTYLEGFPRPDSKYDETILAIPRANSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNQLGRSFFLSRLFDLEVRSEFEGGDVVEKVRVLPRKIHLQAGTDAPLNVTFLRAPSNALLKVEVPLVFRGEDISPGLKKGAALNTIKRTVKFLCPADIIPPYIDLDLSELDVGQKLVMGDLIVHPALKLIQSKDEPVCKIMGQRVSELQKKK* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2119 257 Pfam Ribosomal protein TL5, C-terminal domain 165 247 IPR020057 -
Amo06g2119 257 PANTHER BNAA01G13300D PROTEIN 29 256 - -
Amo06g2119 257 Pfam Ribosomal L25p family 55 156 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Amo06g2119 257 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 29 256 - -
Amo06g2119 257 Gene3D Ribosomal protein L25, beta domain 162 254 IPR037121 -
Amo06g2119 257 SUPERFAMILY Ribosomal protein L25-like 57 247 IPR011035 GO:0006412
Amo06g2119 257 CDD Ribosomal_L25_TL5_CTC 52 158 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Amo06g2119 257 Gene3D Ribosomal Protein L25; Chain P 52 159 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2119 Amo-Chr6 76736980 76740663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2119 K02897 - nnu:104610237 402.519