Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2118 ATGTACAACAGCAACAACAACAGTAACAGCAACATCCTGGCGTCTCGGACGAGCTCGCGGTCGGTGACGGAAACTGTTAACGGCTCTCACAAGTTTGTAATCAAAGGTTACTCTCTGGCGAAGGGGATCGGAGTTGGGAAGCACATAGCGAGCGAGACCTTCAGCGTTGGAGGGTACCAGTGGGCCATATACTTCTACCCTGACGGCAAGAACCCTGAGGACAACTCCGCCTATGTCTCTGTCTTCATCGCCCTCGCCAGTGACGGTACCGACGTTAGGGCACTCTTTGAGCTCACCCTCCTCGACCAGAGTGGCAACGGCAAGCACAAGGTCCACAGCCACTTTGACCGCTCCCTCGAAAGCGGACCCTACACTCTCAAGTACCGCGGCAGCATGTGGGGCTATAAGCGATTTTTCAAACGAGCTCAGCTCGAGGCATCAACCTTCCTCAAGGATGACTGCTTGAAAATAAACTGCACAGTTGGTGTTGTGGTGTCATCCATAGACTGTTCAAAGTTAAACACAATACAAGTTCCTGAATCTGATATTGGGGCACATTTTGGCATGCTGTTAGAAAATGAAGAAGGCTCTGATGTTACCTTTTCTGTACATGGAGAAAGGTTTCATGCACATAAGCTTGTACTAGCTGCTCGGTCAACTGCATTTGAAACAGAGTTTTTCAATGGGATGGATGAAAATGATCAGGAGATAGTTGTTACTGACATGGAACCTAAGGTTTTCAAGGCATTGCTTCATTTTATTTATAGAGACACTCTTATAGAAGATGAAGAGCTCTTTATGTCACGGTCAACATTCTTTGCTTCAATATCCGACTCATTTGCAGCAAAATTGTTGGCTGCTGCTGAAAAGTATGATTTGCCAAGACTGAAGCTGATGTGCGAGTCCGTAATCTGCAAAGACATATCTATTGATTCTGTTGCCTATATATTGGCCCTTGCTGATCGTTATCATGCTACAGAACTGAAGTCTATTTGCCTCCAGTTTTCTGCTGAAAACCTTGTTGCTGTGATGCAATCTGAGGGTTTTGAGTACCTTAAGGAACATTGTCCTTTGCTACAATCAGAACTACTAAAGATAGTGGCCGGATGTGAGGAGGAATTTAGTGGAGAAGGAAAATGTAAAAGTGTGTGGGCCCAGTTTTCTGATGGTGGTGACACCAATGATAGGAGTGTAAGACAACAAACATGGGAAAATGGAGTTGAAAGAAGTCAAAGCTTATGGGTTCACCTTTCTGACGGTGTTAACAATGATAGGAGTCCAGGGCAAGAAGCTTGA 1296 0.4545 MYNSNNNSNSNILASRTSSRSVTETVNGSHKFVIKGYSLAKGIGVGKHIASETFSVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASDGTDVRALFELTLLDQSGNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNTIQVPESDIGAHFGMLLENEEGSDVTFSVHGERFHAHKLVLAARSTAFETEFFNGMDENDQEIVVTDMEPKVFKALLHFIYRDTLIEDEELFMSRSTFFASISDSFAAKLLAAAEKYDLPRLKLMCESVICKDISIDSVAYILALADRYHATELKSICLQFSAENLVAVMQSEGFEYLKEHCPLLQSELLKIVAGCEEEFSGEGKCKSVWAQFSDGGDTNDRSVRQQTWENGVERSQSLWVHLSDGVNNDRSPGQEA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2118 431 CDD MATH 28 161 IPR002083 GO:0005515
Amo06g2118 431 SUPERFAMILY POZ domain 176 306 IPR011333 -
Amo06g2118 431 MobiDBLite consensus disorder prediction 1 20 - -
Amo06g2118 431 Gene3D - 307 381 - -
Amo06g2118 431 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 12 381 - -
Amo06g2118 431 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 26 165 IPR008974 GO:0005515
Amo06g2118 431 Gene3D Potassium Channel Kv1.1; Chain A 173 302 IPR011333 -
Amo06g2118 431 ProSiteProfiles BTB domain profile. 197 263 IPR000210 GO:0005515
Amo06g2118 431 CDD BTB_POZ_BPM_plant 183 305 - -
Amo06g2118 431 SUPERFAMILY TRAF domain-like 24 163 - -
Amo06g2118 431 Pfam BTB/POZ domain 189 306 IPR000210 GO:0005515
Amo06g2118 431 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 12 381 IPR045005 GO:0016567
Amo06g2118 431 SMART BTB_4 197 308 IPR000210 GO:0005515
Amo06g2118 431 MobiDBLite consensus disorder prediction 392 431 - -
Amo06g2118 431 SMART math_3 32 144 IPR002083 GO:0005515
Amo06g2118 431 CDD BACK_AtBPM-like 305 365 IPR034090 -
Amo06g2118 431 ProSiteProfiles MATH/TRAF domain profile. 27 161 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2118 Amo-Chr6 76720478 76724114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2118 K10523 - gmx:100809683 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2997 16 130523346 130527577 Amo06g2118 06 76720478 76724114 hybridization