Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2080 ATGGGTATCAAAATCTTCATGGTTTCCTTCATTGTAACCTCAATATTTCTCATTTTCTTCTACATCCCCATAAGACTAACCACACCAATATCTAACAGCAGAAACTACTTCAATGCAATCAAATCCATCAACAACAACAACAACAACAGAACATACCCAGTTACATTTGCCTACTTGATCTCTGCATCAAAAGGGGATTTTGTGAAGCTCAAGAGATTGATGAAGGTTCTGTACCACCCAGGGAACTACTACTTGATTCACATGGATTATGGGGCACCACAAATTGAACACAAGAAAGTTGCAGAATTTGTGGCCAATGAACCTGTGTTTGGTGAAGTTGGGAATGTTTGGGTTGTTGGGAAACCCAATTTGGTGACATATAGGGGACCAACAATGCTTGCAACGACCCTTCATGCCATGGCAATGCTTCTTAGGATCTGTCACTGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCTTTGGTAACACAAGATGATCTGATTCAAGCTTTTAGTGAGGTACCAAGGGATATCAATTTTGTACAGCATAGCAGTCGCTTGGGTTGGAAATTTAATAAGAGAGGGAAGCCTATGATTATAGACCCGGGTCTATATAGCCTTAATAAATCAGAAATTTGGTGGGTCATTAAGCAAAGGAGTCTCCCAACATCTTTTAAACTCTACACAGGTTCAGCATGGACAATACTATCAAGATCATTTTCAGAGTATTGCATTATGGGCTGGGAAAATTTGCCAAGGACCCTTCTCCTTTACTACACTAACTTCGTGTCGTCGCCGGAAGGATACTTCCAAACGGTCATATGCAACTCTCATGACTACAAGAACACCACTGCTAACCATGACCTTCATTACATCACTTGGGACAATCCTCCGAAACAGCATCCGAGGTCTCTAGGGCTGCGAGATTTCCGGAAAATGGTTATGAGTAGCCGTCCGTTCGCCAGAAAGTTCAAGCGGAATGACCTTGTCCTCGATAAGATTGATAGAGAGCTTTTGAAGAGACATCATGGGCAATTTTCTTTTGGTGGATGGTGTTCATCAAAGAGTGATGGAATTCATAGAACATGTTCAGGTTTGAGGAGTGAGAATTATGGTGTGCTCAACCCTGGTCCGGGATCAAGAAGGTTGAAGAGTTTGATAACAAAACTTCTAAACGAAAGATTTTTTCACAAACAGCAGTGCAAGTAA 1212 0.4117 MGIKIFMVSFIVTSIFLIFFYIPIRLTTPISNSRNYFNAIKSINNNNNNRTYPVTFAYLISASKGDFVKLKRLMKVLYHPGNYYLIHMDYGAPQIEHKKVAEFVANEPVFGEVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRICHWDWFINLSASDYPLVTQDDLIQAFSEVPRDINFVQHSSRLGWKFNKRGKPMIIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFSEYCIMGWENLPRTLLLYYTNFVSSPEGYFQTVICNSHDYKNTTANHDLHYITWDNPPKQHPRSLGLRDFRKMVMSSRPFARKFKRNDLVLDKIDRELLKRHHGQFSFGGWCSSKSDGIHRTCSGLRSENYGVLNPGPGSRRLKSLITKLLNERFFHKQQCK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2080 403 Pfam Core-2/I-Branching enzyme 56 314 IPR003406 GO:0016020|GO:0016757
Amo06g2080 403 PANTHER GLYCOSYLTRANSFERASE 1 403 IPR044610 GO:0015020
Amo06g2080 403 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2080 Amo-Chr6 75890494 75894339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2080 56 403 Glycosyltransferase AT4G27480 56.160 3.88e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2080 - - gmx:100818137 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g2772 16 123709424 123713549 Amo06g2080 06 75890494 75894339 hybridization