Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2036 ATGACAATGGCGCTATCATCATCTTCATGCTTCTCTTCTTCCTATTCACCGCTCGCTCCTCCTCCTTCACTCCCTCGCCACCCTCTCATTAGCCTCAATTTCAAACCCAACTGTCGTGCCCGTGGCGGTTCTTCTCATCCCAAACTCAAAGCCTCCGTGGCTGCGCCGCCACTCTTCTCCGGCGCCACCAGACATGGCCTCGAAACTGTCAACATTGCTGAAGARGTCACCCAGTTGATTGGAAATACTCCAATGGTGTACCTCAACAAGGTTACAGAAGGSTGTGTGGCAAACGTTGCTGCAAAACTTGAGTCTATGGAACTCTGCAGAAGTGTCAAGGATAGAATTGGCTTTAGTATGTTGTCTGATGCAGAAGAGTTTGGAGATATTTCTCCGGGGAAGACTGTTTTAGTTGAGCCAACAACTGGAAACACAGGACTTGGCATCGCTTTTGTTGCAGCAACAAAAGGGTACAAACTTATAGTAACCATGCCTGCTTCCGTAAATCTTGAAAGGAGAATCCTTTTGCGTGCATTTGGGGCAGAGATTGTTTTGACTGATGCAGAAAAGGGATTGAAAGGGGCAGTTGAAAAAGCTGAAGAAATTGRTCAAAGTACACCCAATGCTTACATGTTTAGACAGTTTGATAACATGAATAATGCAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCATTGGTAATATTGATGTATTGGTTGCCGGTATTGGAACTGGTGGCACTGTTACCGGCACTGGACGTTACCTGAAAATGATGAACACCAACATAAAGGTGGTTGGTGTGGAACCTGCTGACAGAAGTATAATCTCAGGAGACAATCCAGGTTTCATGCCAAACATTTTGGATATCAAACTGCTCGACGAAGTTATCAAGGTTACAAATGTTGAAGCTATTGAAATGGCTAGGAGATTAGCGTTGGAAGAAGGTTTGCTGGTCGGAATTTCTTCAGGAGCTGCAGCTGCAGCTGCCATAAGTTTGGCAAGACGGCCAGAGAATTCTGGGAAACTTATCGTGATGTCCCCTCTCACTTACATGCTCCATTTTGATAACTTCCTCCTATTTTTCCCTTTTTTTTTGTTGGTCTTACACTACACACACACTAGAAGTAGAAAGGGTCCTATATTCCACTCTTGA 1167 0.4464 MTMALSSSSCFSSSYSPLAPPPSLPRHPLISLNFKPNCRARGGSSHPKLKASVAAPPLFSGATRHGLETVNIAEEVTQLIGNTPMVYLNKVTEGCVANVAAKLESMELCRSVKDRIGFSMLSDAEEFGDISPGKTVLVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNLERRILLRAFGAEIVLTDAEKGLKGAVEKAEEIXQSTPNAYMFRQFDNMNNAKIHFETTGPEIWEDTIGNIDVLVAGIGTGGTVTGTGRYLKMMNTNIKVVGVEPADRSIISGDNPGFMPNILDIKLLDEVIKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAISLARRPENSGKLIVMSPLTYMLHFDNFLLFFPFFLLVLHYTHTRSRKGPIFHS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2036 388 PANTHER CYSTATHIONINE BETA-SYNTHASE 51 350 - -
Amo06g2036 388 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 51 350 - -
Amo06g2036 388 TIGRFAM cysKM: cysteine synthase 77 350 IPR005856 GO:0004124|GO:0006535
Amo06g2036 388 Gene3D - 114 216 IPR036052 -
Amo06g2036 388 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 72 350 IPR036052 -
Amo06g2036 388 Pfam Pyridoxal-phosphate dependent enzyme 76 346 IPR001926 -
Amo06g2036 388 Gene3D - 78 350 IPR036052 -
Amo06g2036 388 CDD CBS_like 81 349 - -
Amo06g2036 388 TIGRFAM cysK: cysteine synthase A 77 350 IPR005859 GO:0004124|GO:0006535
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2036 Amo-Chr6 74265492 74269069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2036 68 350 Miscellaneous Gene Families AT3G03630 79.152 2.57e-149 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2036 K22846 - gmx:100816974 508.064